Gene Sros_5548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5548 
Symbol 
ID8668842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6068666 
End bp6069745 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341044 
Protein GI271966848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.352514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.222506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCGA TCGGTGAGAA TCTGCTCAGA GTCATGGAGC CGGAGCTCGG ATACCGGGAG 
CAGGCCGGGC AGCGCACCAC GTTCGGCGAG TGGTATTCCA CCAATGTCGT CAAGGACCCC
CAGTACAGAA CGGCCCCCTG GTGCGACATG GTCATCGCCT GGGCCGCCGG GAAGGCAGGG
ATCGAGGACT TCGTCGGCCA GTTCGCCTGG ACGCCCTCCC ACGCCCGCTG GTTCGAGGCG
CGGGACGCGT GGTCCGGCGA GCCGGAGCCG GGGGCCCTGG TCTTCTTCGA CTGGTCCGGC
GGCAAGGACA TCAAGGGCAT CGACCACGTC GGCGTCGTCG AGCGGGTGGA GGGTGGAACG
CTCCACACCA TCGAGGGCAA CGTCGACGGG GTCTGGCTGA AGCGCAAGAC GCGCGACGAG
AGCAAGGTCG TCGGCTACGG TCTGCCGCGC AAGGTCAAGG AGCGCCTGAC GGGTGAGGAC
GCGCCCGTCC CGGTGACGGC CGGACGGATC AAGACTGGCG CGGCGACGGC CGCCGGATCC
GTGACCGCCT CCGTGACCGG CCGCCCGGAG ACACCCCATG TCCCCACGGA GGCCGTACCG
GTCGCGGGAG TGCTCCTCCT CGCCCTCGGC GCGACGCTTG CCCTGGCCAG ACGCCGTCCG
CGCGCCTCGG CGGCGGGAGG GGCACCCGCC CCGGCGGCCT GGCCGCCCTC CCTCCCGGCG
GACAGGCACT CCCGCGTCCC GGCGGGCGGA CGCCACCGCA GGCGGGGACC GGGCACGGAG
ACGTCCCACG GACCCGGCAC GGAGACGGTT CCCGGAGCGG GCACAGGGAT GGTCCACGGA
GCGGGGACGG AGACATTCCC TGGACCGGGC GGGGAGACGG TCCCCCCGCC AGACGTGAAG
CCATCCCCCG GGCCGGGCGG GGAGACGCCC CTCGGACCGG GCGTCGACCG GCCGGGGGCG
TCGGCCGGAG GGGCCGGGCC CCGGCAGGCC GTCCGGCACG TGCACCGGCG GGCGGGCGGC
GGGGCCGGTC CGGCGCGACC GGCGGGTGCC AGGGCCGGGC GCCGGCCGTA CTCGCCCTGA
 
Protein sequence
MDPIGENLLR VMEPELGYRE QAGQRTTFGE WYSTNVVKDP QYRTAPWCDM VIAWAAGKAG 
IEDFVGQFAW TPSHARWFEA RDAWSGEPEP GALVFFDWSG GKDIKGIDHV GVVERVEGGT
LHTIEGNVDG VWLKRKTRDE SKVVGYGLPR KVKERLTGED APVPVTAGRI KTGAATAAGS
VTASVTGRPE TPHVPTEAVP VAGVLLLALG ATLALARRRP RASAAGGAPA PAAWPPSLPA
DRHSRVPAGG RHRRRGPGTE TSHGPGTETV PGAGTGMVHG AGTETFPGPG GETVPPPDVK
PSPGPGGETP LGPGVDRPGA SAGGAGPRQA VRHVHRRAGG GAGPARPAGA RAGRRPYSP