10 homologs were found in PanDaTox collection
for query gene Pecwa_2247 on replicon NC_013421
Organism: Pectobacterium wasabiae WPP163



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013421  Pecwa_2247  putative kinase  100 
 
 
177 aa  371  1e-102  Pectobacterium wasabiae WPP163  Bacteria  normal  0.239871  n/a   
 
 
-
 
NC_012917  PC1_1951  putative kinase  80.79 
 
 
177 aa  308  2e-83  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.97582  n/a   
 
 
-
 
NC_009832  Spro_2252  putative serine protease  52.87 
 
 
198 aa  196  1.0000000000000001e-49  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.0000202856 
 
 
-
 
NC_011988  Avi_5336  glucokinase  40.94 
 
 
478 aa  157  9e-38  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3226  hypothetical protein  32.56 
 
 
182 aa  44.3  0.0008  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3714  hypothetical protein  32.56 
 
 
194 aa  44.3  0.0009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.13961  hitchhiker  0.00508785 
 
 
-
 
NC_012669  Bcav_3278  hypothetical protein  24.26 
 
 
181 aa  43.9  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.191166  hitchhiker  0.00385332 
 
 
-
 
NC_009943  Dole_1042  general secretory pathway protein E  31.43 
 
 
570 aa  41.6  0.006  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.90473  n/a   
 
 
-
 
NC_011830  Dhaf_3528  type II secretion system protein E  32.86 
 
 
586 aa  41.2  0.007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.305202  n/a   
 
 
-
 
NC_009654  Mmwyl1_0210  hypothetical protein  28.87 
 
 
197 aa  40.8  0.01  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>