Gene Rcas_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3714 
Symbol 
ID5541216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4869826 
End bp4870410 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content59% 
IMG OID640895825 
Producthypothetical protein 
Protein accessionYP_001433772 
Protein GI156743643 
COG category[R] General function prediction only 
COG ID[COG0645] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.13961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00508785 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGCAG TTAATCGTCC ATTGCTTATT GCCATGAAAG GTCATCCCGG CGCTGGCAAA 
AGTGCGGTTG CGCGCGGTCT CAGCCGTCGT CTTGGCATTC CTCTGATCGA TAAGGATGAC
ATCAAAGATG TACTGGACGG TCATGTGGCG GATGCAGGCG GGCTGGCGTA CATTGCGATG
TTCAACGTCG CGCGTCGGCA GTTACTCCAG AACCTGAGCG TCATCTGCGA CAGCCCGCTG
AGTGAAGTTG GCGGATACAC CACCGCTTGC GTCGTCGCCC ACGATACGGG CGCGCGGCTG
CTCGTGATCG AATGCGTCTG TTCATCGGAA GAGGAATGGC GACGCCGGAT CGAACAACGC
GCCGCGTTGC GCCTGCCGTC GCACCATGTG ACTACATGGG AGCATCTGCA AGAACACCTG
CGCCGACGGG CTGACGTCTC AAACTATGCC ATTCACGAGC CGCATCTGGT CGTCGATACC
TTTGCGCCAC TCGAAGAGGT GCTCCATACC ATTCTGGCGT GGATCGAAAC GGTCGGCGCT
ACCCCGATGC CTGCCGGTGT GCGTCGAGAA AATCCTGTAA AATGA
 
Protein sequence
MAAVNRPLLI AMKGHPGAGK SAVARGLSRR LGIPLIDKDD IKDVLDGHVA DAGGLAYIAM 
FNVARRQLLQ NLSVICDSPL SEVGGYTTAC VVAHDTGARL LVIECVCSSE EEWRRRIEQR
AALRLPSHHV TTWEHLQEHL RRRADVSNYA IHEPHLVVDT FAPLEEVLHT ILAWIETVGA
TPMPAGVRRE NPVK