Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3714 |
Symbol | |
ID | 5541216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4869826 |
End bp | 4870410 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895825 |
Product | hypothetical protein |
Protein accession | YP_001433772 |
Protein GI | 156743643 |
COG category | [R] General function prediction only |
COG ID | [COG0645] Predicted kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.13961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00508785 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGCAG TTAATCGTCC ATTGCTTATT GCCATGAAAG GTCATCCCGG CGCTGGCAAA AGTGCGGTTG CGCGCGGTCT CAGCCGTCGT CTTGGCATTC CTCTGATCGA TAAGGATGAC ATCAAAGATG TACTGGACGG TCATGTGGCG GATGCAGGCG GGCTGGCGTA CATTGCGATG TTCAACGTCG CGCGTCGGCA GTTACTCCAG AACCTGAGCG TCATCTGCGA CAGCCCGCTG AGTGAAGTTG GCGGATACAC CACCGCTTGC GTCGTCGCCC ACGATACGGG CGCGCGGCTG CTCGTGATCG AATGCGTCTG TTCATCGGAA GAGGAATGGC GACGCCGGAT CGAACAACGC GCCGCGTTGC GCCTGCCGTC GCACCATGTG ACTACATGGG AGCATCTGCA AGAACACCTG CGCCGACGGG CTGACGTCTC AAACTATGCC ATTCACGAGC CGCATCTGGT CGTCGATACC TTTGCGCCAC TCGAAGAGGT GCTCCATACC ATTCTGGCGT GGATCGAAAC GGTCGGCGCT ACCCCGATGC CTGCCGGTGT GCGTCGAGAA AATCCTGTAA AATGA
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Protein sequence | MAAVNRPLLI AMKGHPGAGK SAVARGLSRR LGIPLIDKDD IKDVLDGHVA DAGGLAYIAM FNVARRQLLQ NLSVICDSPL SEVGGYTTAC VVAHDTGARL LVIECVCSSE EEWRRRIEQR AALRLPSHHV TTWEHLQEHL RRRADVSNYA IHEPHLVVDT FAPLEEVLHT ILAWIETVGA TPMPAGVRRE NPVK
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