8 homologs were found in PanDaTox collection
for query gene Pden_3828 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008687  Pden_3828  hypothetical protein  100 
 
 		 285 aa  590  1e-167  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.607101 
 
 
-
 
NC_011080  SNSL254_A1139  replication protein  25.33 
 
 		 326 aa  53.1  0.000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.00398063  hitchhiker  2.1893400000000002e-24 
 
 
-
 
NC_009997  Sbal195_0773  hypothetical protein  32.89 
 
 		 249 aa  51.6  0.00001  Shewanella baltica OS195  Bacteria  normal  1  hitchhiker  0.00104231 
 
 
-
 
NC_009052  Sbal_3612  putative replication protein  32.89 
 
 		 249 aa  51.6  0.00002  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000425732  n/a   
 
 
-
 
NC_009665  Shew185_0743  putative replication protein  32.89 
 
 		 249 aa  51.6  0.00002  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0770  hypothetical protein  32.89 
 
 		 244 aa  51.2  0.00002  Shewanella baltica OS223  Bacteria  normal  0.0218266  normal  0.283783 
 
 
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NC_010322  PputGB1_3439  putative transcriptional regulator  30.68 
 
 		 249 aa  45.8  0.0008  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.0000000119584  unclonable  9.09525e-17 
 
 
-
 
NC_010658  SbBS512_E2159  replication protein  25.71 
 
 		 274 aa  43.9  0.003  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000201859  n/a   
 
 
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