Gene SNSL254_A1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1139 
Symbol 
ID6483150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1143292 
End bp1144272 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content49% 
IMG OID642736541 
Productreplication protein 
Protein accessionYP_002040299 
Protein GI194444747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00398063 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.1893400000000002e-24 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATGA CCCTAATGGC CCGGGCGATG GCAATAAAAA CCGGAAACCC AATTCGTAAA 
CTGGTGCTGA TTAAACTTGC TGATAACGCC AATGATAATG GCGAATGCTG GCCATCTTAT
CAGCATATTG CTGATCATTG TGAATGCAGC AGGAGTGCTG TTCGTACGCA CATTGACGCG
CTTATTGGCA TGGGCGTTTT AACAAAAGAA AACCGCATGG GTATAAACAA TGGTAAGGGA
AATACGTCGA ATGTGTATTA CCTGAATCTT GATAACCCTG TGCCACCAAA AAGCACAGCC
CCTGTGCCGT CAAAAATCAC AGGTATGCCG TTAGAAAACA CACCCCCTAT GCCATGTGGT
GGCACCAGAA CCAGTCACTC TTTTGAACCA GTCAATGAAC CTAATGATCC CCCTAACCCC
CAGAAGGGGA AGGGCGACGA ATGGATCCTT GCTGACGCTA AAAAAGCCCT GGAATTCTAC
AACGAACAAA CCGGAACCCG TTGCCGTGAT ATTAAGCCGT TCGTACTAAT GCTGACGCCG
ACACAAACAC GCGAAGCATA CACACTTGCT GAGCTGCAAT TGGTTATTCG TTGGGTACTG
GCTACTTGGC GCCGCCGTGG TTCTGGTTTG CCAAAACCGG CCAATATTTG CCGCGTAAAT
CGCTTTGACG GTTATCTCGC GGATGCAGAA GCATGGGCTA CTACGGAGGC TGATGTCGAT
CCGGATGCTG TCATGAAAGG CTACAACGAG ATATTCGCTG ACACATTGCC TGCTGCTGAA
CTGGATGCCG ATCGCCGGGG GATGATTATT CGCCTGGCTG CTCACATGAA AAATAAAACT
ACGGGGGCAT TTCTTGGCTA TTTCGAAAAA TTCCGCGCCG ATGCACCCGA TTTTTATTTC
GGTGCCAGTG GCTGGCGCGC CAGCTTTGAT TATCTGATGA AACCTGAAAC GTTGCGTAAA
ACAAGGGAGG AAGCACTGTG A
 
Protein sequence
MSMTLMARAM AIKTGNPIRK LVLIKLADNA NDNGECWPSY QHIADHCECS RSAVRTHIDA 
LIGMGVLTKE NRMGINNGKG NTSNVYYLNL DNPVPPKSTA PVPSKITGMP LENTPPMPCG
GTRTSHSFEP VNEPNDPPNP QKGKGDEWIL ADAKKALEFY NEQTGTRCRD IKPFVLMLTP
TQTREAYTLA ELQLVIRWVL ATWRRRGSGL PKPANICRVN RFDGYLADAE AWATTEADVD
PDAVMKGYNE IFADTLPAAE LDADRRGMII RLAAHMKNKT TGAFLGYFEK FRADAPDFYF
GASGWRASFD YLMKPETLRK TREEAL