10 homologs were found in PanDaTox collection
for query gene Pden_3635 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008687  Pden_3635  hypothetical protein  100 
 
 
154 aa  309  7.999999999999999e-84  Paracoccus denitrificans PD1222  Bacteria  normal  0.218364  normal 
 
 
-
 
NC_011757  Mchl_1151  protein of unknown function DUF1311  28.24 
 
 
170 aa  47  0.0001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.881669  normal 
 
 
-
 
NC_002947  PP_0821  hypothetical protein  31.62 
 
 
136 aa  45.4  0.0003  Pseudomonas putida KT2440  Bacteria  normal  0.163557  normal  0.0923221 
 
 
-
 
NC_010172  Mext_1024  hypothetical protein  28.17 
 
 
164 aa  45.1  0.0003  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.418129 
 
 
-
 
NC_009512  Pput_0848  hypothetical protein  31.62 
 
 
128 aa  45.1  0.0004  Pseudomonas putida F1  Bacteria  normal  normal  0.796587 
 
 
-
 
NC_010322  PputGB1_0862  hypothetical protein  32.95 
 
 
128 aa  43.9  0.0008  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2187  hypothetical protein  31.25 
 
 
134 aa  42.4  0.002  Burkholderia sp. 383  Bacteria  normal  0.063502  normal 
 
 
-
 
NC_008687  Pden_3634  hypothetical protein  27.73 
 
 
179 aa  42.4  0.002  Paracoccus denitrificans PD1222  Bacteria  normal  0.258453  normal 
 
 
-
 
NC_010501  PputW619_4365  hypothetical protein  31.03 
 
 
128 aa  42.4  0.002  Pseudomonas putida W619  Bacteria  normal  0.751601  normal  0.995062 
 
 
-
 
NC_010725  Mpop_0956  protein of unknown function DUF1311  29.41 
 
 
164 aa  41.2  0.005  Methylobacterium populi BJ001  Bacteria  normal  0.622923  normal 
 
 
-
 
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