15 homologs were found in PanDaTox collection
for query gene Pcar_3010 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007498  Pcar_3010  hypothetical protein  100 
 
 
148 aa  303  4.0000000000000004e-82  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000030092  n/a   
 
 
-
 
NC_008609  Ppro_0133  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.74 
 
 
147 aa  102  1e-21  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1324  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.82 
 
 
164 aa  70.5  0.000000000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.40204  normal  0.242107 
 
 
-
 
NC_013173  Dbac_2059  hypothetical protein  29.71 
 
 
162 aa  63.9  0.0000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0223  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.94 
 
 
166 aa  63.5  0.000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0900072  normal  0.0817193 
 
 
-
 
NC_008751  Dvul_1568  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.76 
 
 
145 aa  57.8  0.00000006  Desulfovibrio vulgaris DP4  Bacteria  normal  0.854175  normal 
 
 
-
 
NC_009943  Dole_2144  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.91 
 
 
147 aa  50.8  0.000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0846  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  37.88 
 
 
125 aa  46.2  0.0002  Thermobispora bispora DSM 43833  Bacteria  normal  0.303881  normal  0.0908937 
 
 
-
 
NC_007404  Tbd_0006  hypothetical protein  28.15 
 
 
151 aa  42  0.003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0505  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  39.39 
 
 
125 aa  41.6  0.004  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3763  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.89 
 
 
166 aa  41.2  0.005  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4829  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40 
 
 
142 aa  40.8  0.006  Frankia sp. EAN1pec  Bacteria  normal  0.0116535  normal  0.0388032 
 
 
-
 
NC_013131  Caci_6484  pyridoxamine 5'-phosphate oxidase-related FMN- binding  36.36 
 
 
122 aa  40.8  0.006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2360  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.23 
 
 
150 aa  40.4  0.009  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_009767  Rcas_3461  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.91 
 
 
170 aa  40  0.01  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00895829 
 
 
-
 
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