| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1324 |
|---|
| Symbol | |
|---|
| ID | 8419153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1550348 |
|---|
| End bp | 1550842 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645037900 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN- binding |
|---|
| Protein accession | YP_003198190 |
|---|
| Protein GI | 258405448 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3467] Predicted flavin-nucleotide-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.40204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.242107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC CTGACGCCCC GCCACCGGTC TTTTGGAGTC CGCACTGGCA TGCCTTTTTT
ACCGGATTTT TCACTGAGCA GCGTACCGCG GTGCTGGCTA CAGCCCGGGA GGATCAACCG
TACTGCAGTC TTATGGCCTT CGCCTGGCTG GACGGAGATC CCCGCCAGCT TGTGATGGCC
TCACCGTCGC ACAGCGAAAA AATGACGAAT ATCGAGCACA ATCCAAAGGT CTCCCTGTTG
ATCGACAGCA GCCGCAACGC CCCTGAAGAC AGTCATACGG CCAAGGCGGT GACTGTCCTG
GGCACGGCCC GGATCTGTCC CGCTGGAGAT CAGGACCGGG CCGTGGCCGC ATTATCTGAG
CGCCACCCGC ATCTGGCCTC CTTTGTCCAG GACCCAGGCA CAGCCTTGCT CTGCGTGAGC
GCACACCGGT TGCTGCTTGT GGAGCATTTT CAGGACGTGA CCCTGATCGA GACCGGGATC
ACGGATCAGG AGTAA
|
|---|
| Protein sequence | MTPPDAPPPV FWSPHWHAFF TGFFTEQRTA VLATAREDQP YCSLMAFAWL DGDPRQLVMA
SPSHSEKMTN IEHNPKVSLL IDSSRNAPED SHTAKAVTVL GTARICPAGD QDRAVAALSE
RHPHLASFVQ DPGTALLCVS AHRLLLVEHF QDVTLIETGI TDQE
|
|---|
| |