13 homologs were found in PanDaTox collection
for query gene Ppro_0133 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_0133  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 
147 aa  300  4.0000000000000003e-81  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_3010  hypothetical protein  40.74 
 
 
148 aa  102  1e-21  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000030092  n/a   
 
 
-
 
NC_013223  Dret_1324  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.01 
 
 
164 aa  70.5  0.000000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.40204  normal  0.242107 
 
 
-
 
NC_008554  Sfum_0223  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.33 
 
 
166 aa  67.8  0.00000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0900072  normal  0.0817193 
 
 
-
 
NC_013173  Dbac_2059  hypothetical protein  32.54 
 
 
162 aa  62.4  0.000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2144  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.9 
 
 
147 aa  58.2  0.00000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0444  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.03 
 
 
247 aa  45.4  0.0003  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.51 
 
 
244 aa  43.9  0.0008  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.45404 
 
 
-
 
NC_007406  Nwi_0349  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.58 
 
 
245 aa  43.1  0.001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.334445  normal  0.250597 
 
 
-
 
NC_009485  BBta_7366  hypothetical protein  28.35 
 
 
242 aa  42.4  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.708194  normal 
 
 
-
 
NC_011004  Rpal_0362  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.25 
 
 
244 aa  41.6  0.004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.34488  n/a   
 
 
-
 
NC_007925  RPC_0598  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.13 
 
 
247 aa  41.2  0.005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_1568  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.08 
 
 
145 aa  40.8  0.007  Desulfovibrio vulgaris DP4  Bacteria  normal  0.854175  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>