Gene Tbd_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0006 
Symbol 
ID3673841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp6165 
End bp6620 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content63% 
IMG OID637708665 
Producthypothetical protein 
Protein accessionYP_313764 
Protein GI74316024 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG CAATCAAGCA GAAAATCCTC GCGCTCCTGG ACGAGCACCG GATCCTGACC 
CTCGCCACGC TAAGGCCCGA CGGCTGGCCG CAGGCGACGA CCGTGGGCTA TGGCAACGAC
GGGCTCACGC TCTATTTCCT CTGCGGCCTT GAGAGCCAGA AGGCGGCGAA CCTGGCCCGC
GACGATCGCG TTTCGCTGAC GATCGATCAC GACACGCCGA ACGTGATGGA GATCACGGGG
CTATCGATGG CGGCGCATGC GCAACGCATC GACGACCGGG CCGAAGCGGA GAAGGCCTTG
GGCCTGCTGA TGCAGAAATA CCCTGAGCCT CAGGAGCCCT TGCCGTTTCC CAAGCCCGCG
CCGGAGGAGG TTGCCATCTT CCGCGTGACG CCGGTGGTGA TCTCCGTACT CGACTATACG
AAGGGGTTTA CGCACGCGGA TCTTGTCATG TGCTAG
 
Protein sequence
MDDAIKQKIL ALLDEHRILT LATLRPDGWP QATTVGYGND GLTLYFLCGL ESQKAANLAR 
DDRVSLTIDH DTPNVMEITG LSMAAHAQRI DDRAEAEKAL GLLMQKYPEP QEPLPFPKPA
PEEVAIFRVT PVVISVLDYT KGFTHADLVM C