6 homologs were found in PanDaTox collection
for query gene Pcal_1055 on replicon NC_009073
Organism: Pyrobaculum calidifontis JCM 11548



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009073  Pcal_1055  transcription factor TFIIB, cyclin-related  100 
 
 
154 aa  311  2.9999999999999996e-84  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0859371 
 
 
-
 
NC_010525  Tneu_1330  transcription factor TFIIB cyclin-related  58.28 
 
 
155 aa  187  5e-47  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.301409  normal  0.138516 
 
 
-
 
NC_008701  Pisl_0955  zinc finger TFIIB-type domain-containing protein  52.98 
 
 
155 aa  167  4e-41  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal  0.33185 
 
 
-
 
NC_009376  Pars_2132  zinc finger TFIIB-type domain-containing protein  52.63 
 
 
175 aa  163  1.0000000000000001e-39  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_009376  Pars_1649  transcription factor TFIIB, cyclin-related  46.67 
 
 
165 aa  125  2.0000000000000002e-28  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.821335 
 
 
-
 
NC_009073  Pcal_0430  zinc finger TFIIB-type domain-containing protein  31.82 
 
 
184 aa  61.6  0.000000004  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
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