Gene Tneu_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1330 
Symbol 
ID6165210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1191146 
End bp1191613 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content52% 
IMG OID641668485 
Producttranscription factor TFIIB cyclin-related 
Protein accessionYP_001794702 
Protein GI171185783 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.301409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.138516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGTC CGTACTGCAG TTCTGACAAA ATAGTGTTGC GAGACGGCGA GTATGTGTGT 
ACAGAGTGCG GCACGGTTGT GGGATACGAG GTGGTGCCGC CCAGAGTTAA GCTAGCTACG
CCGGTAATTA AAAGCCGCCG CATTATAGCT CTCTTAGAGG AGGAGGACAA ACAAACCGTG
AAGATGAAAT ACAGCGACAT GGTAAAGTTC TACATCTCAA AAATCGCAAG AGAGCTTGGC
GTTGCCGGAA TAGAACAGGA GGCTATGCGG CTTTTTTCGG TGTTGGACAA AAGAGCTTAC
CAGGGCAAAA GCCCAAGGGC GGTGGCGGCG GCTGTGGTAT ACCTGGCCAC AGAAAGGGCG
AGGTACCACG TACACAAGCG CGATATAGCC GCTCTGGTGA ACATAAGCAA GTTCACCGTG
AGAGACACCG TGTCCAGGCT TAGGCGCTAT GTACCAGCTA CTGACTAG
 
Protein sequence
MICPYCSSDK IVLRDGEYVC TECGTVVGYE VVPPRVKLAT PVIKSRRIIA LLEEEDKQTV 
KMKYSDMVKF YISKIARELG VAGIEQEAMR LFSVLDKRAY QGKSPRAVAA AVVYLATERA
RYHVHKRDIA ALVNISKFTV RDTVSRLRRY VPATD