Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2132 |
Symbol | |
ID | 5055853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1906701 |
End bp | 1907228 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640469684 |
Product | zinc finger TFIIB-type domain-containing protein |
Protein accession | YP_001154330 |
Protein GI | 145592328 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATA CGTATTACAC AAAAAATCAG ATCAAGTACT TATTCGTCAT GATATGTCCA TACTGTAAAT CAACTAACAT TACACTTGCC GACGGCGAAT ACGTGTGTAG AGACTGCGGC ACAGTGCTAG GACCAGAGAT GCTTCCGCCC AGGTTAAGGC AGGTGCCTGT GCCTGTACAC AAAGGCAAGA TAGTGCTTAC GATACTCGAA AAAGAAGACA AAACAACAAT AAAGAAGAGG TACAGCGAGT TGGTAGAGCA CTACGTCGCT AAAATCGCGG CCGCTCTAGC GAGAAAGGAT CTGGAAATGG TCGCGCTAGA AATATTTAGA AATCTTGACA AACGCGTCTA CCAGGGCAAA ACCCCGAAAG CTATTGCCGC AGCCCTAGTG TACCTAGCGG CCGAGAGGGC AGGTATCCAC ATATATAAGC AGACGATAGC GAGAATTCTG GGAATTTCTA AGTTCACCAT TAGGGACACA GTCACACGCC TAAGGGGGCA TGTTGCGTCT ATTAACACGT CTTCTTGA
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Protein sequence | MKYTYYTKNQ IKYLFVMICP YCKSTNITLA DGEYVCRDCG TVLGPEMLPP RLRQVPVPVH KGKIVLTILE KEDKTTIKKR YSELVEHYVA KIAAALARKD LEMVALEIFR NLDKRVYQGK TPKAIAAALV YLAAERAGIH IYKQTIARIL GISKFTIRDT VTRLRGHVAS INTSS
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