Gene Pars_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2132 
Symbol 
ID5055853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1906701 
End bp1907228 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID640469684 
Productzinc finger TFIIB-type domain-containing protein 
Protein accessionYP_001154330 
Protein GI145592328 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATA CGTATTACAC AAAAAATCAG ATCAAGTACT TATTCGTCAT GATATGTCCA 
TACTGTAAAT CAACTAACAT TACACTTGCC GACGGCGAAT ACGTGTGTAG AGACTGCGGC
ACAGTGCTAG GACCAGAGAT GCTTCCGCCC AGGTTAAGGC AGGTGCCTGT GCCTGTACAC
AAAGGCAAGA TAGTGCTTAC GATACTCGAA AAAGAAGACA AAACAACAAT AAAGAAGAGG
TACAGCGAGT TGGTAGAGCA CTACGTCGCT AAAATCGCGG CCGCTCTAGC GAGAAAGGAT
CTGGAAATGG TCGCGCTAGA AATATTTAGA AATCTTGACA AACGCGTCTA CCAGGGCAAA
ACCCCGAAAG CTATTGCCGC AGCCCTAGTG TACCTAGCGG CCGAGAGGGC AGGTATCCAC
ATATATAAGC AGACGATAGC GAGAATTCTG GGAATTTCTA AGTTCACCAT TAGGGACACA
GTCACACGCC TAAGGGGGCA TGTTGCGTCT ATTAACACGT CTTCTTGA
 
Protein sequence
MKYTYYTKNQ IKYLFVMICP YCKSTNITLA DGEYVCRDCG TVLGPEMLPP RLRQVPVPVH 
KGKIVLTILE KEDKTTIKKR YSELVEHYVA KIAAALARKD LEMVALEIFR NLDKRVYQGK
TPKAIAAALV YLAAERAGIH IYKQTIARIL GISKFTIRDT VTRLRGHVAS INTSS