| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1649 |
|---|
| Symbol | |
|---|
| ID | 5056171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1487522 |
|---|
| End bp | 1488019 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640469192 |
|---|
| Product | transcription factor TFIIB, cyclin-related |
|---|
| Protein accession | YP_001153854 |
|---|
| Protein GI | 145591852 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.821335 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCC GCGGCGCGGC GAGGGCGGCG TTTCCGTGGC CTAGTTGCCC CCACTGCCAG
TCGGCGAACG CGGCGGCTGA TGGCGAGTAT GTGTGCAGAG AATGCGGGAC TGTGATAGGC
CCAGTGCTTG TGCCCCCGGT GACAAAAGAG GCGCCTCGGC CGCCCCCGAG ATACAGATTA
ATAATGACAG CTCTCGAAAG GGAGAGCAGG AGGAGCGTCA GGAGGTATTC CGAAGTCGTG
AAAATGCATC TTGGCAAGGT GGCTAAGGCC TTGGGCGCTG AGGTGGCGGC CGTGGCGCTA
GACATCTTCA AGCGCCTAGA CAAGCGGGTC TACCAGGGGA GGTCGCCGAG GGTGGTGGCG
GCCACATTAG CATACCTCGC GGCGGAGAGG CTGGGCATAT ACGTGCACAA GCGGGTAATA
GCAGAAATCC TAAAAGTGTC TAAATTCACG ATAAAAGACA CGGTGTGGCG CCTAAGGCGG
TATTTGCAAG AGGCTTAA
|
|---|
| Protein sequence | MTIRGAARAA FPWPSCPHCQ SANAAADGEY VCRECGTVIG PVLVPPVTKE APRPPPRYRL
IMTALERESR RSVRRYSEVV KMHLGKVAKA LGAEVAAVAL DIFKRLDKRV YQGRSPRVVA
ATLAYLAAER LGIYVHKRVI AEILKVSKFT IKDTVWRLRR YLQEA
|
|---|
| |