17 homologs were found in PanDaTox collection
for query gene Patl_2300 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_2300  protein of unknown function, Spy-related  100 
 
 		 147 aa  295  2e-79  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.000000365275  n/a   
 
 
-
 
NC_011138  MADE_00939  hypothetical protein  54.01 
 
 		 149 aa  139  9.999999999999999e-33  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00188533  n/a   
 
 
-
 
NC_009092  Shew_3569  protein of unknown function, Spy-related  37.61 
 
 		 147 aa  57  0.00000008  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000221664  normal  1 
 
 
-
 
NC_008700  Sama_3431  spheroplast protein y precursor, putative  36.5 
 
 		 163 aa  55.1  0.0000003  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.0000129305  normal  0.324571 
 
 
-
 
NC_009901  Spea_3932  protein of unknown function Spy-related  30.06 
 
 		 160 aa  54.3  0.0000005  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.000000000105476  n/a   
 
 
-
 
NC_009831  Ssed_0280  protein of unknown function, Spy-related  31.4 
 
 		 168 aa  53.9  0.0000008  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.00000525037  unclonable  0.0000000000829203 
 
 
-
 
NC_008345  Sfri_0313  spheroplast protein y precursor, putative  30.09 
 
 		 163 aa  49.3  0.00002  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000163608  n/a   
 
 
-
 
NC_010506  Swoo_0282  protein of unknown function Spy-related  29.17 
 
 		 154 aa  49.3  0.00002  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000126692  unclonable  0.0000000242912 
 
 
-
 
NC_012912  Dd1591_3500  protein of unknown function Spy-related  28.95 
 
 		 158 aa  48.1  0.00003  Dickeya zeae Ech1591  Bacteria  normal  0.764021  n/a   
 
 
-
 
NC_003910  CPS_1751  hypothetical protein  27.97 
 
 		 152 aa  46.6  0.0001  Colwellia psychrerythraea 34H  Bacteria  unclonable  0.0000749705  n/a   
 
 
-
 
NC_009783  VIBHAR_00148  periplasmic repressor CpxP  31.29 
 
 		 169 aa  44.3  0.0006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_1561  periplasmic repressor CpxP  32.5 
 
 		 166 aa  43.5  0.001  Marinomonas sp. MWYL1  Bacteria  unclonable  0.0000000204071  unclonable  0.00000000000190173 
 
 
-
 
NC_012918  GM21_3144  hypothetical protein  30.3 
 
 		 178 aa  42  0.003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_012880  Dd703_3377  protein of unknown function Spy-related  30.08 
 
 		 157 aa  41.2  0.005  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0677  hypothetical protein  26.51 
 
 		 159 aa  40.8  0.006  Nitrosococcus oceani ATCC 19707  Bacteria  unclonable  0.00000000000364222  n/a   
 
 
-
 
NC_013456  VEA_002220  P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc- resistance associated protein  28.48 
 
 		 170 aa  40.4  0.007  Vibrio sp. Ex25  Bacteria  unclonable  0.0000000285493  n/a   
 
 
-
 
NC_009457  VC0395_A2263  periplasmic repressor CpxP  32 
 
 		 167 aa  40.4  0.009  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000000748096  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>