Gene MADE_00939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00939 
Symbol 
ID6776523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp989477 
End bp989926 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID642754371 
Producthypothetical protein 
Protein accessionYP_002125247 
Protein GI196155758 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00188533 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAATTACCGG TGTTTTATTA AGTGCATGTA TCGCAACGAC TGCCTATGCA 
GGCGGTAAGC ATTCTGATGA GCGCAGAGGC GGGAGCGTTT TTCCGCTGCA TAAAATGGAA
AAAGTACTTG CCCTTACCGA CGAGCAAATA GCACAATTTC AAACGTTAAA GGAAGAGCTT
AAAGCGGAAC GCCGAGCTAA AAAATCGGAA ATGCGTGAAG AGGGCATGCG TAAAAATAGA
AACCTTTTGG CTGGCCTAAA TCCAGATGAT GCAGACTATC AGGATAAAGT GAATGCCATT
GCCGAGGAAA AAGCGCAGCA AGTAAAAGCG CGCTTTCTAA AACGCGCGGA GATTCGTGCA
AAAGTTGCTG ATATCCTTAC CGATGAACAG CTAGAAAAAT TTGATGAAAT GAAAGGGAAG
CGTGGAAAAA AGCAGCGTAA GCACAGCTAA
 
Protein sequence
MKKLITGVLL SACIATTAYA GGKHSDERRG GSVFPLHKME KVLALTDEQI AQFQTLKEEL 
KAERRAKKSE MREEGMRKNR NLLAGLNPDD ADYQDKVNAI AEEKAQQVKA RFLKRAEIRA
KVADILTDEQ LEKFDEMKGK RGKKQRKHS