Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00939 |
Symbol | |
ID | 6776523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 989477 |
End bp | 989926 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754371 |
Product | hypothetical protein |
Protein accession | YP_002125247 |
Protein GI | 196155758 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00188533 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TAATTACCGG TGTTTTATTA AGTGCATGTA TCGCAACGAC TGCCTATGCA GGCGGTAAGC ATTCTGATGA GCGCAGAGGC GGGAGCGTTT TTCCGCTGCA TAAAATGGAA AAAGTACTTG CCCTTACCGA CGAGCAAATA GCACAATTTC AAACGTTAAA GGAAGAGCTT AAAGCGGAAC GCCGAGCTAA AAAATCGGAA ATGCGTGAAG AGGGCATGCG TAAAAATAGA AACCTTTTGG CTGGCCTAAA TCCAGATGAT GCAGACTATC AGGATAAAGT GAATGCCATT GCCGAGGAAA AAGCGCAGCA AGTAAAAGCG CGCTTTCTAA AACGCGCGGA GATTCGTGCA AAAGTTGCTG ATATCCTTAC CGATGAACAG CTAGAAAAAT TTGATGAAAT GAAAGGGAAG CGTGGAAAAA AGCAGCGTAA GCACAGCTAA
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Protein sequence | MKKLITGVLL SACIATTAYA GGKHSDERRG GSVFPLHKME KVLALTDEQI AQFQTLKEEL KAERRAKKSE MREEGMRKNR NLLAGLNPDD ADYQDKVNAI AEEKAQQVKA RFLKRAEIRA KVADILTDEQ LEKFDEMKGK RGKKQRKHS
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