| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3569 |
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| Symbol | |
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| ID | 4922642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4263398 |
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| End bp | 4263841 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165191 |
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| Product | protein of unknown function, Spy-related |
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| Protein accession | YP_001095694 |
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| Protein GI | 127514497 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000221664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CCGCCCTGTT GGCACCCGCT GTGTATGCGG CTGGCCCGGA TGACGGCGGT
TGTCGCCATG AGATGCGTGG TGATCACAAA GGTTACCACG GCGAGATGCA CAAGATGTTT
CGCGGCCTGG ATCTCACCGA TGCCCAGCGC ACTCAGATGA AGGAGCTGAT GCAGTCGCAC
CGCGAGGCGA TGCAGGCCAA GCGTCCATCG GACGAGGTGC GTGCGGCCCA CAAACAGCAG
ATGCTGGATA TGATCACCTC GGACAGCTTC AACGAGGCCG ATCTTAAGGC GATGACGGCC
CAGCGCAGTG AGCAGAGAGC GCAGGCCGCG GTGGAGCGCA TGAAGATGCA ACGCGAAATC
TATCAAATGC TTACCCCTGA GCAGCAGGCT AAATTTAAAG AGAATTTTGC CAAGCGTGGT
GGACGTAAAG GAGATCGCCC ATAG
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| Protein sequence | MTSAALLAPA VYAAGPDDGG CRHEMRGDHK GYHGEMHKMF RGLDLTDAQR TQMKELMQSH
REAMQAKRPS DEVRAAHKQQ MLDMITSDSF NEADLKAMTA QRSEQRAQAA VERMKMQREI
YQMLTPEQQA KFKENFAKRG GRKGDRP
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