| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0313 |
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| Symbol | |
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| ID | 4277208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 343068 |
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| End bp | 343559 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133067 |
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| Product | spheroplast protein y precursor, putative |
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| Protein accession | YP_749014 |
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| Protein GI | 114561501 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000163608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT CATCAATCAT CAAAACGAGT TTAGTTGCCT TAGTGGCAAG CTCGGCTTTA
TTAGCTGGTC AGTTATATGC AGTTGATGCA GCTGATAATA CTGTAAAAAC TGAAAATGTT
ACCGCTAAAG GTGACCGACA TCATGGTCAC AAAGGTGGCA TGCATAAAAT GCTTCGTAAG
CTGGATTTAA CTGATGCCCA AAAAGTTCAA GTAAAAGCCA TCTTTGATAA GTATCAAGCT
AACCGCCCTG AGCGTCCAAC TAAAGAGCAG CGCGCTGAGC ACCGTACAGA AATGTTAGCG
TTAATCACTA CCGCTGGTTT TGATGAAGCA AAAGCAACTG AAATGGCTGA AGCACAGCAA
CAAAAGCATT TACAAAAGAT GCTGACGCAT TTGAAAATCC AAAACGAGAT TTATCAATTA
TTAACGCCTG AACAGCAACA AACGTTTCAA GATAAATTTA AGCTAGGCAA AGGCCACAAA
CCGCGCCGTT AA
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| Protein sequence | MKTSSIIKTS LVALVASSAL LAGQLYAVDA ADNTVKTENV TAKGDRHHGH KGGMHKMLRK
LDLTDAQKVQ VKAIFDKYQA NRPERPTKEQ RAEHRTEMLA LITTAGFDEA KATEMAEAQQ
QKHLQKMLTH LKIQNEIYQL LTPEQQQTFQ DKFKLGKGHK PRR
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