9 homologs were found in PanDaTox collection
for query gene Patl_1353 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_1353  XRE family transcriptional regulator  100 
 
 		 88 aa  182  1.0000000000000001e-45  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.000308869  n/a   
 
 
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NC_008228  Patl_2262  XRE family transcriptional regulator  61.84 
 
 		 90 aa  109  1.0000000000000001e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.167  n/a   
 
 
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NC_007794  Saro_0807  XRE family transcriptional regulator  50 
 
 		 506 aa  44.7  0.0004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_2577  XRE family transcriptional regulator  50 
 
 		 135 aa  41.6  0.003  Delftia acidovorans SPH-1  Bacteria  normal  0.0918178  hitchhiker  0.000133769 
 
 
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NC_010002  Daci_2611  XRE family transcriptional regulator  50 
 
 		 135 aa  41.6  0.003  Delftia acidovorans SPH-1  Bacteria  normal  0.0796411  hitchhiker  0.0000000000000114 
 
 
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NC_008048  Sala_0152  XRE family transcriptional regulator  47.06 
 
 		 93 aa  40.8  0.006  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
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NC_004116  SAG0251  Cro/CI family transcriptional regulator  48.48 
 
 		 72 aa  40.4  0.009  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
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NC_013171  Apre_0591  transcriptional regulator, XRE family  58.06 
 
 		 68 aa  40.4  0.009  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
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NC_008609  Ppro_1460  molybdate metabolism transcriptional regulator  41.82 
 
 		 368 aa  40  0.01  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
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