6 homologs were found in PanDaTox collection
for query gene Patl_2262 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_2262  XRE family transcriptional regulator  100 
 
 		 90 aa  187  5.999999999999999e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.167  n/a   
 
 
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NC_008228  Patl_1353  XRE family transcriptional regulator  61.84 
 
 		 88 aa  109  1.0000000000000001e-23  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.000308869  n/a   
 
 
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NC_008825  Mpe_A3331  putative transcription regulator protein  51.28 
 
 		 94 aa  47  0.00009  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
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NC_003296  RSp1252  putative transcription regulator protein  45.95 
 
 		 88 aa  44.3  0.0006  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008048  Sala_0152  XRE family transcriptional regulator  51.52 
 
 		 93 aa  41.6  0.004  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
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NC_011886  Achl_3647  transcriptional regulator, XRE family  42.86 
 
 		 507 aa  40.4  0.008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
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