| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1353 |
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| Symbol | |
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| ID | 4171850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1627007 |
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| End bp | 1627273 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054366 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_660933 |
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| Protein GI | 109897678 |
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| COG category | [K] Transcription |
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| COG ID | [COG1476] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000308869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACGTA GAAAGAAGTT CAGCGGTGTA CAACTCAAAT CACTTCGCAA AGAAGCTGGA
TACACGCAAG GCGAACTCGC GTTACGAGTC GGTATAAGTC GGGAAACTGT GTCGGCCATC
GAAAACGAAA AGCCTGAAAC CATGAATAGC ATAGGTGTTG AGGTAATTAG TAAGTGGTGG
GCAGTGTGCA GGCAAAAAGC ATCAGAGCAA ACCCGTGAAT CTTTCTTTTC TACTGTTATG
GATTATTTCG GTTTCAATCA TACCTAA
|
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| Protein sequence | MSRRKKFSGV QLKSLRKEAG YTQGELALRV GISRETVSAI ENEKPETMNS IGVEVISKWW
AVCRQKASEQ TRESFFSTVM DYFGFNHT
|
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