8 homologs were found in PanDaTox collection
for query gene Patl_1203 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_1203  hypothetical protein  100 
 
 
278 aa  548  1e-155  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0789  hypothetical protein  61.7 
 
 
280 aa  323  2e-87  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.00000257398  n/a   
 
 
-
 
NC_008228  Patl_0788  hypothetical protein  63.91 
 
 
280 aa  307  1.0000000000000001e-82  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0115526  n/a   
 
 
-
 
NC_012918  GM21_1564  protein of unknown function DUF1555  34.39 
 
 
230 aa  73.9  0.000000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2671  protein of unknown function DUF1555  33.48 
 
 
230 aa  67  0.0000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.985757  n/a   
 
 
-
 
NC_009485  BBta_1025  hypothetical protein  31.06 
 
 
239 aa  58.2  0.0000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0398824  normal 
 
 
-
 
NC_009485  BBta_7154  hypothetical protein  45.78 
 
 
2039 aa  55.5  0.000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007801  Jann_4274  hypothetical protein  35.59 
 
 
224 aa  43.1  0.005  Jannaschia sp. CCS1  Bacteria  unclonable  0.0000000000240713  normal  0.501804 
 
 
-
 
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