Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1025 |
Symbol | |
ID | 5151234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1064663 |
End bp | 1065382 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640556018 |
Product | hypothetical protein |
Protein accession | YP_001237186 |
Protein GI | 148252601 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0398824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAAT CATTGGCTCT GCTGGCATTG ACTGCCGCAT GCATCGCTTC CGTCCAGGCC AAGGCTGCCA CGGTTACGCT GAACGCGCTG GCCTTCGGTT CCACAACGGC TCCGGTTTCT GCCAATCAGA TCGTTGAAAC GTTCGACAGC CGGTCCTCCG CAAACTTCAC CAACGGCGCT CTGACGTTCT CGTCTTCAGG TGCGACTATC CAGAACGGTT CGGTGGCCGG GCAGTTTGCC GCGCCGTATT TTCCCGGCGG TTCCGACACT ACGAATTACC TGAACGTCTT CGGTGGGGCG ACGGAGACCA TCACGGTCGG GAACGGGTCG CTGGGAACCT ATTTCGGCCT CTATATCGGT TCTCTTGATA CCTACAACTC GATCGCCTTC TACAAGAACA ACGTCCTGAT TGAGAGCTTC TCGGGCGCGC AGATCGCGTC TTTGACCGGG TTGACCGCGT CGTCTTACCC GAACTCGACG GCGACCAATG CAAATCGGTT TGTCGAGTTC TCGTTCGACA TCACCTCCTA TTTCGACAAG ATCGTGTTGG CGAGCGGTAC GAATTCGCTG GAAGTGGACA ACGCGACTGT CAATCTGAAC ACGATGACTC AGGGCGTTCC TGAGGCCTCG ACTTGGGTCA TGATGATCCT GGGCTTCCTG AGTGTCGGCC TGATCGGTTA TCGCCGGCGC GGCAGCGGTG TCGCCCTGCG CCTGGTGTGA
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Protein sequence | MRKSLALLAL TAACIASVQA KAATVTLNAL AFGSTTAPVS ANQIVETFDS RSSANFTNGA LTFSSSGATI QNGSVAGQFA APYFPGGSDT TNYLNVFGGA TETITVGNGS LGTYFGLYIG SLDTYNSIAF YKNNVLIESF SGAQIASLTG LTASSYPNST ATNANRFVEF SFDITSYFDK IVLASGTNSL EVDNATVNLN TMTQGVPEAS TWVMMILGFL SVGLIGYRRR GSGVALRLV
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