Gene BBta_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1025 
Symbol 
ID5151234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1064663 
End bp1065382 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content58% 
IMG OID640556018 
Producthypothetical protein 
Protein accessionYP_001237186 
Protein GI148252601 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0398824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAT CATTGGCTCT GCTGGCATTG ACTGCCGCAT GCATCGCTTC CGTCCAGGCC 
AAGGCTGCCA CGGTTACGCT GAACGCGCTG GCCTTCGGTT CCACAACGGC TCCGGTTTCT
GCCAATCAGA TCGTTGAAAC GTTCGACAGC CGGTCCTCCG CAAACTTCAC CAACGGCGCT
CTGACGTTCT CGTCTTCAGG TGCGACTATC CAGAACGGTT CGGTGGCCGG GCAGTTTGCC
GCGCCGTATT TTCCCGGCGG TTCCGACACT ACGAATTACC TGAACGTCTT CGGTGGGGCG
ACGGAGACCA TCACGGTCGG GAACGGGTCG CTGGGAACCT ATTTCGGCCT CTATATCGGT
TCTCTTGATA CCTACAACTC GATCGCCTTC TACAAGAACA ACGTCCTGAT TGAGAGCTTC
TCGGGCGCGC AGATCGCGTC TTTGACCGGG TTGACCGCGT CGTCTTACCC GAACTCGACG
GCGACCAATG CAAATCGGTT TGTCGAGTTC TCGTTCGACA TCACCTCCTA TTTCGACAAG
ATCGTGTTGG CGAGCGGTAC GAATTCGCTG GAAGTGGACA ACGCGACTGT CAATCTGAAC
ACGATGACTC AGGGCGTTCC TGAGGCCTCG ACTTGGGTCA TGATGATCCT GGGCTTCCTG
AGTGTCGGCC TGATCGGTTA TCGCCGGCGC GGCAGCGGTG TCGCCCTGCG CCTGGTGTGA
 
Protein sequence
MRKSLALLAL TAACIASVQA KAATVTLNAL AFGSTTAPVS ANQIVETFDS RSSANFTNGA 
LTFSSSGATI QNGSVAGQFA APYFPGGSDT TNYLNVFGGA TETITVGNGS LGTYFGLYIG
SLDTYNSIAF YKNNVLIESF SGAQIASLTG LTASSYPNST ATNANRFVEF SFDITSYFDK
IVLASGTNSL EVDNATVNLN TMTQGVPEAS TWVMMILGFL SVGLIGYRRR GSGVALRLV