| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1203 |
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| Symbol | |
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| ID | 4172609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1454211 |
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| End bp | 1455047 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054210 |
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| Product | hypothetical protein |
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| Protein accession | YP_660783 |
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| Protein GI | 109897528 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAACT TAGTTAAGAA AACAAAATTA GTAACACTAG CCGCTCTTTT AGCGTTTGGT
GCAGCAAGTC AAGCAAGCGC TGCGACTATC AGTTTCGGTG GCCAGACAGC GACTGACGGC
TCAGGTCAAA CAAGCTCTCG TATAGATGCT AGCAACCAAA TTACTGCAGC GACTGTTTCA
AACGGATATT TCGTTGAAAC CTTCGATAGT GCAACTGTTT TCCCGGTTGG TGCTGGTGGT
GACACAAGTT ATAATGTTGC TGGCGCATCT GATGGTTGTC AAATCAACTC GCCGTTAGCA
GTAACTCCAA GCGGTGCTGG TGTATTGAAT GTTCGTAATA ATTCAGTACC TAACGTAGCA
GCAGCGCCAG CTGGTGACAA CACTTGTTAC GCATACACCA CACCAGAAAA TATTGGATCA
GATAGCTCGG TAGATATTAA TTATACAACG TTCTTAGCGA ACGTTGGTGG TATTGAAGCT
AGCCTTGCTG GTTCAAAAAT TAACTACTTG GGCTTCTACT GGGGCTCAGT AGATACTTAT
AACAGCTTTG AGTTTTATGA TGGCGCTACT TTAGTTGCAT CAATCACTGG TCCACAGTTG
TTGGCACAAT TAAACGGTAG CCCTGGTAAC CAAACATCAC CTGCATCTAA CACTTATGTG
AATATTGACT TCTCGGATGC CGAAGCGTTC GATAACTTCA AAGTAATTTC TTCTGGTATC
GCTGGAGAGT TCGATAACGT TGTTGTTGGT TTAAAACAAG TTCCAGCTCC TGCAAACTTG
GCTTTCTTAG GTCTTGGTCT TTTAGGTCTT GGTCTTGGTA GAAGATTTAA AAAATAA
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| Protein sequence | MSNLVKKTKL VTLAALLAFG AASQASAATI SFGGQTATDG SGQTSSRIDA SNQITAATVS
NGYFVETFDS ATVFPVGAGG DTSYNVAGAS DGCQINSPLA VTPSGAGVLN VRNNSVPNVA
AAPAGDNTCY AYTTPENIGS DSSVDINYTT FLANVGGIEA SLAGSKINYL GFYWGSVDTY
NSFEFYDGAT LVASITGPQL LAQLNGSPGN QTSPASNTYV NIDFSDAEAF DNFKVISSGI
AGEFDNVVVG LKQVPAPANL AFLGLGLLGL GLGRRFKK
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