10 homologs were found in PanDaTox collection
for query gene PP_3707 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_3707  hypothetical protein  100 
 
 		 471 aa  972    Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0979489 
 
 
-
 
NC_007908  Rfer_1321  hypothetical protein  38.46 
 
 		 264 aa  62.4  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3262  hypothetical protein  30.63 
 
 		 250 aa  55.8  0.000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2369  hypothetical protein  28.26 
 
 		 241 aa  54.3  0.000005  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010553  BamMC406_6751  hypothetical protein  26.97 
 
 		 242 aa  53.5  0.000009  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1830  hypothetical protein  28.68 
 
 		 241 aa  53.1  0.00001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_1508  hypothetical protein  28.97 
 
 		 268 aa  52.4  0.00002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  7.02689e-16 
 
 
-
 
NC_007949  Bpro_5162  hypothetical protein  32.93 
 
 		 254 aa  51.6  0.00003  Polaromonas sp. JS666  Bacteria  normal  0.105605  normal  0.430535 
 
 
-
 
NC_007973  Rmet_2339  hypothetical protein  25 
 
 		 241 aa  51.6  0.00003  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000000000143796  unclonable  0.000000136454 
 
 
-
 
NC_008782  Ajs_1271  hypothetical protein  25 
 
 		 241 aa  51.6  0.00003  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
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