Gene PP_3707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3707 
Symbol 
ID1046358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4228788 
End bp4230203 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content46% 
IMG OID637147118 
Producthypothetical protein 
Protein accessionNP_745840 
Protein GI26990415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0979489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGGG GATGCCTCTC TATAGCGGGC GCATATTCAG CGCTGGTGCT AGAGGCTGGA 
GCTTTTGGGT TATGGGGAAT AAATGATATG GGCTTGGTTT GCGGAAATTC TTATTTTATT
GATGGCGACG ATTGGTCTGA GCTCAGATCA TTTATGGTGG TGAGTCAGTC TGAAGATTAT
ATAAGCGTAT TTGACATCGA TGGGAACGCT CAGGAACTAC CGAGAGAGGT TCTGCCAAGC
TTGCGGCTGC ATCCCATCTC GTACGATAGG TCGAGCAAAA AATTTAAAGC ATATAAGTTC
GTCCAGGATG TCGCGAGCTC ACTGATTCGC CAGTACGAAC AAGTCGGCAT TTGCGAATTG
ATTGAGAAGA TATCTGGTCA TGATCGAATA GAAATTTCGG ATGAAGGACT TGTTTTTCTG
TTAAAAAGCC TGGTTGCGAA TGAAAGCTTT GCTGTCAAGT CGGTTGGTCG TGGTAAGGCG
AACCAGATAT TTCTAACTTT AGGAGATCAG AGAAAGGAGA TTGAAAAGCG TCGAGTGTTT
GCTGCGTCTA TCGCAAGCGA ACTTGATGCT CTGAGCTCTA GGATTCGTCT GATTGTATCT
CATTCAGGTA CAGTTGGAAC ATACAGGGAG AGCCTCTTAC AGAACGTCCT GCGCAAGCAT
CTACCGGAAC GCTATCACGT GGCAACCGGA TTTATATATG GGTGTCCCAG GCAGATCGAT
ATTCTTATAT ATGATCGATT GGACTATGCG CCTTTATTTC GTGAGGGCGA CCTTGTTGTA
GTGCCTCCAA ATTCAGTGCG TGCGGTGATT GAGGTGAAGA CATCGCTCAC TGCTGATGAA
CTAAGAAAAA GCTTAAAATT ACTGTCCGCC GTAGCTATGC ATGATGATTG CAGTCCGCCG
ATATTCAAAG GTATATTTTC GTTTGAGAGT GTGCTCACTA AGTCGTCTCT GTGTAAAATT
ATTGCAGAGT ACTATATCCC TGATAGGTTT TCCGAGGACT GTTCGGCCGA TGAGATTATG
CAGCCTTTTT CACATTTTAC ATGCGTTTGT GTACTGGAAA AGCACTATGT ATACACGTTG
TATGAGAAAA GCTTAAAGGG GATGATGATT CCTGGGTTGT ACTCTAGGAG GAGCCATACA
AACCTGAAGA GCCAGGTCGC ATTTTTTATG CAGTCGCTGC TTGCTCATTT GAGGTTTGGC
GGCATGAAGA ACAACAATCT TTATTATATG GACGCCATGC TTGGTGGAGA TACCATCTCT
GAGTATCACG GCGATTTGGT AGACGGGAGA TGGGGGCCGT ATTTTTTTGA GGCCGAAGGT
ACGCCGGATG CCGCTGAGAA TGTAGAGGCC ATGGAAAAGC TTTTAATTAA GGTGCAGGAT
TGGCTTGAGG GCTCTCCGGT TTCCTGGAAT GAATGA
 
Protein sequence
MTGGCLSIAG AYSALVLEAG AFGLWGINDM GLVCGNSYFI DGDDWSELRS FMVVSQSEDY 
ISVFDIDGNA QELPREVLPS LRLHPISYDR SSKKFKAYKF VQDVASSLIR QYEQVGICEL
IEKISGHDRI EISDEGLVFL LKSLVANESF AVKSVGRGKA NQIFLTLGDQ RKEIEKRRVF
AASIASELDA LSSRIRLIVS HSGTVGTYRE SLLQNVLRKH LPERYHVATG FIYGCPRQID
ILIYDRLDYA PLFREGDLVV VPPNSVRAVI EVKTSLTADE LRKSLKLLSA VAMHDDCSPP
IFKGIFSFES VLTKSSLCKI IAEYYIPDRF SEDCSADEIM QPFSHFTCVC VLEKHYVYTL
YEKSLKGMMI PGLYSRRSHT NLKSQVAFFM QSLLAHLRFG GMKNNNLYYM DAMLGGDTIS
EYHGDLVDGR WGPYFFEAEG TPDAAENVEA MEKLLIKVQD WLEGSPVSWN E