7 homologs were found in PanDaTox collection
for query gene PP_3336 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_3336  hypothetical protein  100 
 
 
150 aa  298  1e-80  Pseudomonas putida KT2440  Bacteria  normal  0.566862  normal 
 
 
-
 
NC_007492  Pfl01_0599  hypothetical protein  33.33 
 
 
133 aa  45.1  0.0003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.222423  normal 
 
 
-
 
NC_009656  PSPA7_1329  hypothetical protein  31.71 
 
 
122 aa  42.7  0.001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3339  hypothetical protein  28.68 
 
 
135 aa  42.7  0.002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4627  hypothetical protein  35.38 
 
 
129 aa  42.4  0.002  Pseudomonas putida W619  Bacteria  normal  normal  0.103577 
 
 
-
 
NC_004578  PSPTO_1854  hypothetical protein  32.23 
 
 
129 aa  41.2  0.005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0163081  n/a   
 
 
-
 
NC_010322  PputGB1_4891  hypothetical protein  32.56 
 
 
129 aa  40.4  0.008  Pseudomonas putida GB-1  Bacteria  normal  0.735125  normal 
 
 
-
 
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