Gene PSPTO_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1854 
Symbol 
ID1183499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2026946 
End bp2027335 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content58% 
IMG OID637393233 
Producthypothetical protein 
Protein accessionNP_791678 
Protein GI28869059 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0163081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCGT TGAAACGCAT CAGCCCCTGG ATTGCCTGTC TGGCGGTCTT GCTGAATATG 
TTCGCCATGC CGCTGAGTCG AGCGATGCAG ACGCCGGACA TGCGCCTGAT GTTTTTGGGT
GGATTCTGTT CCGGTGGCGG CTCGGGCGCG CTGCCTCAAG AACTCGGCAA GATGCTCGAT
GCCTTGCAGA TACCCCAGTC CAAACCCGTC ATGCAACATG GCGACTGCTG CTGTGGTCAT
GCCGGGTTGG CAGCATTACC CTCCCGTTAC TATCGGCATT TCCTGCCGCA ATACACATTC
AATACCACCC TCGAAAATCC TGAACTGCTG ACGCTGCATC CAAGGATTCG TTGGCCCAGC
CTAAGCCCGC GCGCCTCTCC TGTCGCCTGA
 
Protein sequence
MSSLKRISPW IACLAVLLNM FAMPLSRAMQ TPDMRLMFLG GFCSGGGSGA LPQELGKMLD 
ALQIPQSKPV MQHGDCCCGH AGLAALPSRY YRHFLPQYTF NTTLENPELL TLHPRIRWPS
LSPRASPVA