Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1854 |
Symbol | |
ID | 1183499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2026946 |
End bp | 2027335 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393233 |
Product | hypothetical protein |
Protein accession | NP_791678 |
Protein GI | 28869059 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0163081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCGT TGAAACGCAT CAGCCCCTGG ATTGCCTGTC TGGCGGTCTT GCTGAATATG TTCGCCATGC CGCTGAGTCG AGCGATGCAG ACGCCGGACA TGCGCCTGAT GTTTTTGGGT GGATTCTGTT CCGGTGGCGG CTCGGGCGCG CTGCCTCAAG AACTCGGCAA GATGCTCGAT GCCTTGCAGA TACCCCAGTC CAAACCCGTC ATGCAACATG GCGACTGCTG CTGTGGTCAT GCCGGGTTGG CAGCATTACC CTCCCGTTAC TATCGGCATT TCCTGCCGCA ATACACATTC AATACCACCC TCGAAAATCC TGAACTGCTG ACGCTGCATC CAAGGATTCG TTGGCCCAGC CTAAGCCCGC GCGCCTCTCC TGTCGCCTGA
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Protein sequence | MSSLKRISPW IACLAVLLNM FAMPLSRAMQ TPDMRLMFLG GFCSGGGSGA LPQELGKMLD ALQIPQSKPV MQHGDCCCGH AGLAALPSRY YRHFLPQYTF NTTLENPELL TLHPRIRWPS LSPRASPVA
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