11 homologs were found in PanDaTox collection
for query gene PP_2266 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_2266  DNA-directed RNA polymerase, bacteriophage and mitochondrial type  100 
 
 		 852 aa  1773    Pseudomonas putida KT2440  Bacteria  normal  0.311743  normal  0.0117981 
 
 
-
 
CP001509  ECD_10004  T7 DNA-directed RNA polymerase  38.78 
 
 		 883 aa  573  1.0000000000000001e-162  Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.000226142  n/a   
 
 
-
 
NC_012892  B21_00704  hypothetical protein  38.78 
 
 		 883 aa  573  1.0000000000000001e-162  Escherichia coli BL21  Bacteria  decreased coverage  0.000228625  n/a   
 
 
-
 
NC_011690  PHATRDRAFT_49483  rpot-like RNA polymerase  29.85 
 
 		 1188 aa  352  2e-95  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.088117  n/a   
 
 
-
 
NC_009363  OSTLU_34669  predicted protein  33.57 
 
 		 922 aa  325  2e-87  Ostreococcus lucimarinus CCE9901  Eukaryota  hitchhiker  0.00224083  normal  0.282079 
 
 
-
 
NC_009046  PICST_36598  mitochondrial DNA-directed RNA polymerase  28.33 
 
 		 1251 aa  278  3e-73  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.269232  normal  0.0177705 
 
 
-
 
NC_007434  BURPS1710b_1652  DNA-dependent RNA polymerase  31.46 
 
 		 769 aa  273  1e-71  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.000000358176  n/a   
 
 
-
 
NC_006686  CND05820  conserved hypothetical protein  28.06 
 
 		 1180 aa  271  4e-71  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
BN001304  ANIA_07609  Putative DNA-directed RNA polymerase Fragment (EC 2.7.7.6) [Source:UniProtKB/TrEMBL;Acc:Q70TF3]  29.94 
 
 		 1391 aa  263  1e-68  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.836257  normal  0.25161 
 
 
-
 
NC_009045  PICST_60150  mitohcondrial RNA polymerase  26.77 
 
 		 1202 aa  231  4e-59  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.569446 
 
 
-
 
NC_007516  Syncc9605_0785  DNA-directed RNA polymerase  24.48 
 
 		 507 aa  129  2.0000000000000002e-28  Synechococcus sp. CC9605  Bacteria  normal  0.146563  normal  0.0414109 
 
 
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