11 homologs were found in PanDaTox collection
for query gene PICST_60150 on replicon NC_009045
Organism: Scheffersomyces stipitis CBS 6054



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009045  PICST_60150  mitohcondrial RNA polymerase  100 
 
 
1202 aa  2486    Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.569446 
 
 
-
 
NC_009046  PICST_36598  mitochondrial DNA-directed RNA polymerase  30.95 
 
 
1251 aa  444  1e-123  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.269232  normal  0.0177705 
 
 
-
 
NC_006686  CND05820  conserved hypothetical protein  35.15 
 
 
1180 aa  385  1e-105  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009363  OSTLU_34669  predicted protein  35.57 
 
 
922 aa  372  1e-101  Ostreococcus lucimarinus CCE9901  Eukaryota  hitchhiker  0.00224083  normal  0.282079 
 
 
-
 
BN001304  ANIA_07609  Putative DNA-directed RNA polymerase Fragment (EC 2.7.7.6) [Source:UniProtKB/TrEMBL;Acc:Q70TF3]  28.94 
 
 
1391 aa  343  1e-92  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.836257  normal  0.25161 
 
 
-
 
NC_011690  PHATRDRAFT_49483  rpot-like RNA polymerase  32.54 
 
 
1188 aa  323  1.9999999999999998e-86  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.088117  n/a   
 
 
-
 
NC_002947  PP_2266  DNA-directed RNA polymerase, bacteriophage and mitochondrial type  26.77 
 
 
852 aa  231  5e-59  Pseudomonas putida KT2440  Bacteria  normal  0.311743  normal  0.0117981 
 
 
-
 
CP001509  ECD_10004  T7 DNA-directed RNA polymerase  28.01 
 
 
883 aa  198  5.000000000000001e-49  Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.000226142  n/a   
 
 
-
 
NC_012892  B21_00704  hypothetical protein  28.01 
 
 
883 aa  198  5.000000000000001e-49  Escherichia coli BL21  Bacteria  decreased coverage  0.000228625  n/a   
 
 
-
 
NC_007434  BURPS1710b_1652  DNA-dependent RNA polymerase  24.83 
 
 
769 aa  157  1e-36  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.000000358176  n/a   
 
 
-
 
NC_007516  Syncc9605_0785  DNA-directed RNA polymerase  27.03 
 
 
507 aa  82.4  0.00000000000004  Synechococcus sp. CC9605  Bacteria  normal  0.146563  normal  0.0414109 
 
 
-
 
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