| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60150 |
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| Symbol | RPO32 |
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| ID | 4839434 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1468481 |
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| End bp | 1472173 |
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| Gene Length | 3693 bp |
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| Protein Length | 1202 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640390749 |
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| Product | mitohcondrial RNA polymerase |
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| Protein accession | XP_001385284 |
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| Protein GI | 150865890 |
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| COG category | [K] Transcription |
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| COG ID | [COG5108] Mitochondrial DNA-directed RNA polymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.569446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGAACTCCGA ATATTCATAC CAGTATACTT ATCAATAGCT TTTTCCAGTC AGTGATGCAG
AATGACTTTA ATCGGTCAAG AAAGCTTCTT GAAAAGTTAC GAAATAAGAT AAATACTCCA
GATGTCAAGA TGGCATCAAT ACATAGAGTG AATTATTACT CTTGCTTTCT GCTTTTACTA
TCCAATCTCA TTTCTCAAGG AAAGGTCCAT ATCCAGAATA TTAAGTTACT CGTTGACGAG
TTTGAATCTG TAGAAAACCT GTTCAAAGCA AATAGAGCAA CTAATGAGAT GAACCAATTA
CGCACAGAGA TACGCTCCAA ACTAGTTCTA TGTGTTGTAA ATAGCCTTGA TGATGGAGTA
AAGTATGGCG GGATATATCA GCAATCTATT GCTAAGTATG CTGGGGCTCT AATAAAGAAT
TTCCATATCA AACCATCTCA GCTAGCCCAG GAAATCACGA AGAAGGAGAC GCTAGATAAG
TTGAATAGAA TTTGTGCGAT TAACTCCTTA ACACCCAAGG AATTGCCTTG GGTAGAAAGA
GTTAGTGCTG AAGTGGACAG CGGTAACTTT GCAGCAAGTG CCATTGACAA TTTCAAAGAT
GACAATGGAT ATGTCAGTCT AGAGAATCTC TGTAGATATA TTGGTTACAC AAGATTTGCC
AACTATGACA GTAACGACTC TCACAAGTTG AAAATGTTTG AAATCTATGA TTCTCTTTCG
ACAGAGAAAG AGAGAGCCGA TTTCATCGAC AACTATTTGG ATTTCAACAA AACCAGAGAA
ATGATACTTG AATCAAACTG TCTTGATTTG GTAGAAAACT TTGATTCCAT ACATGTCCAA
AACAAAGGGA AGCTTTCTAA AAGTAGAGAA TTACAGAGTA TTGGACACTT CAAGCTTATT
CATTCCAAAA TGATCTATTC GTGGTTTGAA TCCAATGTTA AGGAATTACA AAGACTAAAG
AGCAAACTCA AGACCGTTTC TGTTACTACT AACCTTAATG AACAAGAAAA AATACTTACT
AAATACCTCA CGTATCTCGA ACTTATTCCC GAGAGAGCTT TAGTGACATT ATTTCTTTCC
AATATGCTCT CAATGACAAT CTCTTCTAAA GAAGGTGGAG TCAAAGTAGT TACCTTAACA
AAATCCTTGT TATCTTTATT CACTCGATTG CTAATGAAAG ACAAATCATT TACGAATGTA
AAGAAGACAC TTTTAGAATT TTTCAATGAC AAAAATGATG CTGCAAGACT CATTGGAGCC
TTGATCGACA TATTCATTCA CAATTGCAAG TTCAAAATCC CTCCACAGCA ATTCGAGGAA
TTCGTGCAAG CACAGCAACT TCTTCGTCAA TATGTGGAAG GTGACTATAA GAAAGATTCC
CATGATAATT TCGATTCGTT TCATTCCACA TTAGTTCCCT TAGAAGGAAA GAAAACTGTG
GGGATATTAA GAATTCACCT GTACTTGTAT CAACAGTTCA AGATTTACGA TTCTCTCGCA
TTCAATAAAT CTTTATATTT TCCAATGTTG TACCCTCCCA AGCCATGGGT ATCTCCTACC
AATGGTGGAT ACTTGCTTGA TTTGAAGCCA ATAATCACTT CTTCGGACAT TAAGACATCA
ATGAAATATA TTGATAGGGC CAACTCTTCG GGACAATTAA ATTCAACCTA CGAAGCACTC
AATTACCTAG GAAGTAATGC CTGGGCAATC AACTCAGAAG TGCTCCAAGT ATTCAATGAA
GTTATGAAAC TAGACGAAGG ATTTCTTAAA ATTCCGCCCA CTTTAAAGGT ACTAAAAACA
GAAGAACAAG AAGACTATAA TGACCTCAAG ACTAAACGGA TATTGTTCAA CTTGGTTCAC
GTTGTTGCTA ATAGCTACGA TGTAAACGGA GACATGCTCT TCTTGCCACA TAATGTCGAC
TTCCGGGGCC GCGCCTATCC TATGGCTTCT CTATTAACTC ATTATCAAGA AGACGCCGTG
CGAGGTATAA TGATGTTTTG GCATAGTCAA CCTTTGGGTT CTACAGGTCT TAATTGGCTA
AAGTACCAAC TTGCTGGAGT GTTTGGAAAG GACAAGTTGT CATTTGAAAA TAGAATTCAG
TTTGTGGATG AGAATTTGGA ATCTATAAGA GAATCAGCTG AAAATCCCTT GAGCAAGAAT
CTGTGGTGGA AGGAAGCAGA TAAACCGTGG CAGACATTGG CACTTTGTAT TGAGTTGAAT
CGAGCATATA ATTACGTTGA ACAAGGTAAT AAAATAGAAG AGTTCAGGAG CCGGATGCCA
GTTCATCAGG ATGGATCGTG TAACGGTCTA CAACATTATG CTGCATTAGG TGCAGATACA
GCAGGTGGTG AAGCAGTCAA TATTGTTCCC AATAAAGAAA ACTTACTGCA AAGAGGAGAC
GTCTATAGTT CTGTTCTTCA AATTGTGATA GAAAAGGTCC AAAAGGATCT CACAGGAGAA
GGTAATAGTG ATAGTAGCAA TAGCAATTTT GAACTATCTT CAATAGCTAT GCAGATTCTC
AACAGAAAGT TGATTAAGCA GACTGTGATG ACTACTGTTT ATGGTGTAAC TACATATGGT
GGAGCTTCAC AGATCTACCT CCGAATCAAG GACTTGATTC AGGAGCACGA AATTAAGCTC
CACAACGATG AAAAAATTGA TTTGGAATTC CTTGAGAAAT TAAGAAGATA CCGCCGGCCC
CTTTCCTTGT ATCTATCGAA GTACGTTTTG AATTCAATTT CTGAGTTATT TAGTGGTGCC
AGAATAATTC AAGATTGGTT GGTTGACAAT TGCTTCAGGG CTATCAACTC ATTTGATTTG
GAAACTGTAG ACTTTATCCG ACACAAGAGT ACAACCAATA ATATACCATC ATTCTCGAGC
CATACTTCAT TCAAGCCAAT GATGTGGACC TCCCTCTCTG GATTTCCCAT TGTGCAATTA
TACAAGCATA GCAAACTGGA TGTGATTCCA ACGTCTTTGC AACTGATATC CATTAACAAG
CCACAAGAAA TCGCTCCAAT CAACAAGAAA AAGCAGATGA ATGCCATTGC ACCAAACTTC
ATACACTCAA TTGACTCCAT TCATATGCTC ATGACGTGTG TGGCGGCGAA GAAAGCCAAT
ATCCCGTTTG TTTCAGTGCA TGATTCGTTC TGGACATATC CAAACCACGT TGATGAGCTT
TCCGTACTAT TAAGAGAAGA ATTCGTAAGA CTCCATTCAT CTAATATCGC AGAGAATCTA
CGTGAAGATT TGCTATACAC AATGTCTAAG TCGTTCCAGT TGGTCTGGGT GTATAGAGCA
GAGAATGCAC AATTAGTTGA TGAAATAAAG GAACTAAGAA AGACTTACGA TATTTCTTCA
TATGGTGGAG GAACAAAGAT AGATAAGATC CTTTATCATG AACTCAGGCA AATGACAAAT
GACAATTCAA CTGGAGACAA ACCTTTTAAT CGTGAATCAA CTCAAAGTGT CCAAAAAATC
TTAGACAAGC ATAATCCTAC GTTATATTTT AGATCAAGGT ATAACCCCAA ACTCGTTCAA
CAGTACGATT CATCTTTGGA GCTGAAACTT ACCAAAACAT TTAACAGGAA AGAATTCACC
CCTGTTCTAG TTCCAGTATC CATTTTGAAT TGCCCACCAA CAGGAGAACT CGATCTCTCT
GAAGTAATGA AGAGCAGATA TTTCTTCTCC TAA
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| Protein sequence | RTPNIHTSIL INSFFQSVMQ NDFNRSRKLL EKLRNKINTP DVKMASIHRV NYYSCFSLLL
SNLISQGKVH IQNIKLLVDE ATNEMNQLRT EIRSKLVLCV VNSLDDGVKY GGIYQQSIAK
YAGALIKNFH IKPSQLAQEI TKKETLDKLN RICAINSLTP KELPWVERVT SAIDNFKDDN
GYVSLENLCR YIGYTRFANY DSNDSHKLKM FEIYDSLSTE KERADFIDNY LDFNKTREMI
LESNCLDLVE NFDSIHLSKS RELQSIGHFK LIHSKMIYSW FESNVKELQR LKSKLKTVSV
TTNLNEQEKI LTKYLTYLEL IPERALVTLF LSNMLSMTIS SKEGGVKVVT LTKSLLSLFT
RLLMKDKSFT NVKKTLLEFF NDKNDAARLI GALIDIFIHN CKFKIPPQQF EEFVQAQQLL
RQYVEGDYKK DSHDNFDSFH STLVPLEGKK TVGILRIHSY LYQQFKIYDS LAFNKSLYFP
MLYPPKPWVS PTNGGYLLDL KPIITSSDIK TSMKYIDRAN SSGQLNSTYE ALNYLGSNAW
AINSEVLQVF NEVMKLDEGF LKIPPTLKVL KTEEQEDYND LKTKRILFNL VHVVANSYDV
NGDMLFLPHN VDFRGRAYPM ASLLTHYQED AVRGIMMFWH SQPLGSTGLN WLKYQLAGVF
GKDKLSFENR IQFVDENLES IRESAENPLS KNSWWKEADK PWQTLALCIE LNRAYNYVEQ
GNKIEEFRSR MPVHQDGSCN GLQHYAALGA DTAGGEAVNI VPNKENLSQR GDVYSSVLQI
VIEKVQKDLT GEGNSDSSNS NFELSSIAMQ ILNRKLIKQT VMTTVYGVTT YGGASQIYLR
IKDLIQEHEI KLHNDEKIDL EFLEKLRRYR RPLSLYLSKY VLNSISELFS GARIIQDWLV
DNCFRAINSF DLETVDFIRH KSTTNNIPSF SSHTSFKPMM WTSLSGFPIV QLYKHSKSDV
IPTSLQSISI NKPQEIAPIN KKKQMNAIAP NFIHSIDSIH MLMTCVAAKK ANIPFVSVHD
SFWTYPNHVD ELSVLLREEF VRLHSSNIAE NLREDLLYTM SKSFQLVWVY RAENAQLVDE
IKELRKTYDI SSYGGGTKID KILYHELRQM TNDNSTGDKP FNRESTQSVQ KILDKHNPTL
YFRSRYNPKL VQQYDSSLES KLTKTFNRKE FTPVLVPVSI LNCPPTGELD LSEVMKSRYF
FS
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