Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60150 |
Symbol | RPO32 |
ID | 4839434 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1468481 |
End bp | 1472173 |
Gene Length | 3693 bp |
Protein Length | 1202 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640390749 |
Product | mitohcondrial RNA polymerase |
Protein accession | XP_001385284 |
Protein GI | 150865890 |
COG category | [K] Transcription |
COG ID | [COG5108] Mitochondrial DNA-directed RNA polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.569446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGAACTCCGA ATATTCATAC CAGTATACTT ATCAATAGCT TTTTCCAGTC AGTGATGCAG AATGACTTTA ATCGGTCAAG AAAGCTTCTT GAAAAGTTAC GAAATAAGAT AAATACTCCA GATGTCAAGA TGGCATCAAT ACATAGAGTG AATTATTACT CTTGCTTTCT GCTTTTACTA TCCAATCTCA TTTCTCAAGG AAAGGTCCAT ATCCAGAATA TTAAGTTACT CGTTGACGAG TTTGAATCTG TAGAAAACCT GTTCAAAGCA AATAGAGCAA CTAATGAGAT GAACCAATTA CGCACAGAGA TACGCTCCAA ACTAGTTCTA TGTGTTGTAA ATAGCCTTGA TGATGGAGTA AAGTATGGCG GGATATATCA GCAATCTATT GCTAAGTATG CTGGGGCTCT AATAAAGAAT TTCCATATCA AACCATCTCA GCTAGCCCAG GAAATCACGA AGAAGGAGAC GCTAGATAAG TTGAATAGAA TTTGTGCGAT TAACTCCTTA ACACCCAAGG AATTGCCTTG GGTAGAAAGA GTTAGTGCTG AAGTGGACAG CGGTAACTTT GCAGCAAGTG CCATTGACAA TTTCAAAGAT GACAATGGAT ATGTCAGTCT AGAGAATCTC TGTAGATATA TTGGTTACAC AAGATTTGCC AACTATGACA GTAACGACTC TCACAAGTTG AAAATGTTTG AAATCTATGA TTCTCTTTCG ACAGAGAAAG AGAGAGCCGA TTTCATCGAC AACTATTTGG ATTTCAACAA AACCAGAGAA ATGATACTTG AATCAAACTG TCTTGATTTG GTAGAAAACT TTGATTCCAT ACATGTCCAA AACAAAGGGA AGCTTTCTAA AAGTAGAGAA TTACAGAGTA TTGGACACTT CAAGCTTATT CATTCCAAAA TGATCTATTC GTGGTTTGAA TCCAATGTTA AGGAATTACA AAGACTAAAG AGCAAACTCA AGACCGTTTC TGTTACTACT AACCTTAATG AACAAGAAAA AATACTTACT AAATACCTCA CGTATCTCGA ACTTATTCCC GAGAGAGCTT TAGTGACATT ATTTCTTTCC AATATGCTCT CAATGACAAT CTCTTCTAAA GAAGGTGGAG TCAAAGTAGT TACCTTAACA AAATCCTTGT TATCTTTATT CACTCGATTG CTAATGAAAG ACAAATCATT TACGAATGTA AAGAAGACAC TTTTAGAATT TTTCAATGAC AAAAATGATG CTGCAAGACT CATTGGAGCC TTGATCGACA TATTCATTCA CAATTGCAAG TTCAAAATCC CTCCACAGCA ATTCGAGGAA TTCGTGCAAG CACAGCAACT TCTTCGTCAA TATGTGGAAG GTGACTATAA GAAAGATTCC CATGATAATT TCGATTCGTT TCATTCCACA TTAGTTCCCT TAGAAGGAAA GAAAACTGTG GGGATATTAA GAATTCACCT GTACTTGTAT CAACAGTTCA AGATTTACGA TTCTCTCGCA TTCAATAAAT CTTTATATTT TCCAATGTTG TACCCTCCCA AGCCATGGGT ATCTCCTACC AATGGTGGAT ACTTGCTTGA TTTGAAGCCA ATAATCACTT CTTCGGACAT TAAGACATCA ATGAAATATA TTGATAGGGC CAACTCTTCG GGACAATTAA ATTCAACCTA CGAAGCACTC AATTACCTAG GAAGTAATGC CTGGGCAATC AACTCAGAAG TGCTCCAAGT ATTCAATGAA GTTATGAAAC TAGACGAAGG ATTTCTTAAA ATTCCGCCCA CTTTAAAGGT ACTAAAAACA GAAGAACAAG AAGACTATAA TGACCTCAAG ACTAAACGGA TATTGTTCAA CTTGGTTCAC GTTGTTGCTA ATAGCTACGA TGTAAACGGA GACATGCTCT TCTTGCCACA TAATGTCGAC TTCCGGGGCC GCGCCTATCC TATGGCTTCT CTATTAACTC ATTATCAAGA AGACGCCGTG CGAGGTATAA TGATGTTTTG GCATAGTCAA CCTTTGGGTT CTACAGGTCT TAATTGGCTA AAGTACCAAC TTGCTGGAGT GTTTGGAAAG GACAAGTTGT CATTTGAAAA TAGAATTCAG TTTGTGGATG AGAATTTGGA ATCTATAAGA GAATCAGCTG AAAATCCCTT GAGCAAGAAT CTGTGGTGGA AGGAAGCAGA TAAACCGTGG CAGACATTGG CACTTTGTAT TGAGTTGAAT CGAGCATATA ATTACGTTGA ACAAGGTAAT AAAATAGAAG AGTTCAGGAG CCGGATGCCA GTTCATCAGG ATGGATCGTG TAACGGTCTA CAACATTATG CTGCATTAGG TGCAGATACA GCAGGTGGTG AAGCAGTCAA TATTGTTCCC AATAAAGAAA ACTTACTGCA AAGAGGAGAC GTCTATAGTT CTGTTCTTCA AATTGTGATA GAAAAGGTCC AAAAGGATCT CACAGGAGAA GGTAATAGTG ATAGTAGCAA TAGCAATTTT GAACTATCTT CAATAGCTAT GCAGATTCTC AACAGAAAGT TGATTAAGCA GACTGTGATG ACTACTGTTT ATGGTGTAAC TACATATGGT GGAGCTTCAC AGATCTACCT CCGAATCAAG GACTTGATTC AGGAGCACGA AATTAAGCTC CACAACGATG AAAAAATTGA TTTGGAATTC CTTGAGAAAT TAAGAAGATA CCGCCGGCCC CTTTCCTTGT ATCTATCGAA GTACGTTTTG AATTCAATTT CTGAGTTATT TAGTGGTGCC AGAATAATTC AAGATTGGTT GGTTGACAAT TGCTTCAGGG CTATCAACTC ATTTGATTTG GAAACTGTAG ACTTTATCCG ACACAAGAGT ACAACCAATA ATATACCATC ATTCTCGAGC CATACTTCAT TCAAGCCAAT GATGTGGACC TCCCTCTCTG GATTTCCCAT TGTGCAATTA TACAAGCATA GCAAACTGGA TGTGATTCCA ACGTCTTTGC AACTGATATC CATTAACAAG CCACAAGAAA TCGCTCCAAT CAACAAGAAA AAGCAGATGA ATGCCATTGC ACCAAACTTC ATACACTCAA TTGACTCCAT TCATATGCTC ATGACGTGTG TGGCGGCGAA GAAAGCCAAT ATCCCGTTTG TTTCAGTGCA TGATTCGTTC TGGACATATC CAAACCACGT TGATGAGCTT TCCGTACTAT TAAGAGAAGA ATTCGTAAGA CTCCATTCAT CTAATATCGC AGAGAATCTA CGTGAAGATT TGCTATACAC AATGTCTAAG TCGTTCCAGT TGGTCTGGGT GTATAGAGCA GAGAATGCAC AATTAGTTGA TGAAATAAAG GAACTAAGAA AGACTTACGA TATTTCTTCA TATGGTGGAG GAACAAAGAT AGATAAGATC CTTTATCATG AACTCAGGCA AATGACAAAT GACAATTCAA CTGGAGACAA ACCTTTTAAT CGTGAATCAA CTCAAAGTGT CCAAAAAATC TTAGACAAGC ATAATCCTAC GTTATATTTT AGATCAAGGT ATAACCCCAA ACTCGTTCAA CAGTACGATT CATCTTTGGA GCTGAAACTT ACCAAAACAT TTAACAGGAA AGAATTCACC CCTGTTCTAG TTCCAGTATC CATTTTGAAT TGCCCACCAA CAGGAGAACT CGATCTCTCT GAAGTAATGA AGAGCAGATA TTTCTTCTCC TAA
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Protein sequence | RTPNIHTSIL INSFFQSVMQ NDFNRSRKLL EKLRNKINTP DVKMASIHRV NYYSCFSLLL SNLISQGKVH IQNIKLLVDE ATNEMNQLRT EIRSKLVLCV VNSLDDGVKY GGIYQQSIAK YAGALIKNFH IKPSQLAQEI TKKETLDKLN RICAINSLTP KELPWVERVT SAIDNFKDDN GYVSLENLCR YIGYTRFANY DSNDSHKLKM FEIYDSLSTE KERADFIDNY LDFNKTREMI LESNCLDLVE NFDSIHLSKS RELQSIGHFK LIHSKMIYSW FESNVKELQR LKSKLKTVSV TTNLNEQEKI LTKYLTYLEL IPERALVTLF LSNMLSMTIS SKEGGVKVVT LTKSLLSLFT RLLMKDKSFT NVKKTLLEFF NDKNDAARLI GALIDIFIHN CKFKIPPQQF EEFVQAQQLL RQYVEGDYKK DSHDNFDSFH STLVPLEGKK TVGILRIHSY LYQQFKIYDS LAFNKSLYFP MLYPPKPWVS PTNGGYLLDL KPIITSSDIK TSMKYIDRAN SSGQLNSTYE ALNYLGSNAW AINSEVLQVF NEVMKLDEGF LKIPPTLKVL KTEEQEDYND LKTKRILFNL VHVVANSYDV NGDMLFLPHN VDFRGRAYPM ASLLTHYQED AVRGIMMFWH SQPLGSTGLN WLKYQLAGVF GKDKLSFENR IQFVDENLES IRESAENPLS KNSWWKEADK PWQTLALCIE LNRAYNYVEQ GNKIEEFRSR MPVHQDGSCN GLQHYAALGA DTAGGEAVNI VPNKENLSQR GDVYSSVLQI VIEKVQKDLT GEGNSDSSNS NFELSSIAMQ ILNRKLIKQT VMTTVYGVTT YGGASQIYLR IKDLIQEHEI KLHNDEKIDL EFLEKLRRYR RPLSLYLSKY VLNSISELFS GARIIQDWLV DNCFRAINSF DLETVDFIRH KSTTNNIPSF SSHTSFKPMM WTSLSGFPIV QLYKHSKSDV IPTSLQSISI NKPQEIAPIN KKKQMNAIAP NFIHSIDSIH MLMTCVAAKK ANIPFVSVHD SFWTYPNHVD ELSVLLREEF VRLHSSNIAE NLREDLLYTM SKSFQLVWVY RAENAQLVDE IKELRKTYDI SSYGGGTKID KILYHELRQM TNDNSTGDKP FNRESTQSVQ KILDKHNPTL YFRSRYNPKL VQQYDSSLES KLTKTFNRKE FTPVLVPVSI LNCPPTGELD LSEVMKSRYF FS
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