| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36598 |
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| Symbol | RPO41 |
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| ID | 4839989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 409562 |
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| End bp | 413317 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391304 |
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| Product | mitochondrial DNA-directed RNA polymerase |
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| Protein accession | XP_001385433 |
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| Protein GI | 150865988 |
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| COG category | [K] Transcription |
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| COG ID | [COG5108] Mitochondrial DNA-directed RNA polymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.269232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0177705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAGT TCCTCGAGCA TTTGAAACTT CAAGACCAGG AAATCAAGAA GAGTCCTTCT
ATTCACAATA AAACTTTCTC AGAAATCATT GAAAATGAAC CAGAATCCAT TACAGATGAA
CAGAGACGTT TACGGGTATG GTCTTCTGAC TACGATCCAG TAACTAGGTC GCCTTTTGCC
AAAGACGTTT CCCATTTACA GTCACTTTTA GAGGTTCTTT TGACTAGCAA AAACTTCGAC
AGAGCTCGCA AGATCTTGGA GGCCATTCAT CCTCTTTTAT CAGAGCCTCA TACCTTCATC
TTCTCTGTGA ACAAATACTT GCAGACATGG TCCCATGACC CCTCTGTTCA TTACGGAGAT
CTTGAGCAAT TTTTCTCCAC AATGGAGCAG AGATACGGAA TAACAGCCAA TGAGCGGACT
TTTGCGATTA TTCTCGCCAA ATACATTTCG GAAGATGGAC CTTACATCCT GTACTTGAAC
CGTTTCTCTC AATCCAAAAA GACTCAAATA TTGTCTTATA TCGATGTCAT CGGAGTTGAA
GGTCTCATGA AAGTTTTTTC CGATAATAGC ATCAGCATTG AAGATGTCCC CGAGGATTTG
GTGAACCTCT TCAGAGAAGT CAGAAACGAA TTGAACGACA AGGAAACGTT AATATCAGAA
CCAGAATACT TCAACGACGA TAATACAGAA GTACCAACCG TCGATAAGGA TGCTGAATCG
TTACGTGCTG TGGACTCGTT TGGGTTGAAA GTGATTAGAC ATACCCTTTT GGGATTAAGA
GAAGAAGCAG ACTCCAAAGA GATAGTCTCT ATCATCAAGC AAATGGAGGA CGGTTTGGGT
AACCAATCAT GGTCAGACGA TGAAGCATCC AAGTTAGACT TTTTCAAAGT ATACAAAACG
TTAAAGACTG AAGAACAACG TGAGAAATTT AATAGTGGAT TGCATTCGTT CAATCTTACC
AGGCAAAGAA GATTGGAGGT CAGAGGTGCC GATGGGGCTA AGGAAAAATG GAAGCATGAA
TTTGAAGAAA TGCAAAAAAG AGGAGCATTG CCTTTGAACA AAGGATTGAA CGCTCAATTA
TTCCAATGGT ACAAGAACTT ATTGCCATAT GTCAAAAAAG AAGCAGAAAT GTGTCAAAAG
CTAATGGATG GCAAAGTCTC CAAAACGGAT CTTTCGCCGG ACGAAAAGAA ATTGTACAAG
GACAGAGAAT ACTACGCCCC ATACATGGTG CTTGTCCCTC CCGAGAAGAT GTGTGTGATC
ACTATTCTTG AGTTGTTGAA ATTGAACTCC ACTGGTGGTA TTGTAGATGG TATGAGAGCT
GCCAGGGCTC TTATATCTGT AGGTAAAGCT GTTGAACTTG AATACAAGTC ACAATCGTTG
TTGAAGTCTG AAATCAAGGC TTTTTCAAAG AAGGTTAAGT CGACAAACCA GTGGAAGAGA
ATCTTGTCCA ACAAGAAAAA CAACATAATA GAAAATCCAG ACGACTCTAC CGACTGGAGT
TATACAGTAT ATGCGAAGTT GGGAGCAGTT TTGACCAATT TGCTTTTGTT CGTGGCAAAA
GTTCCAGTCA AAGCCCATAA TCCAACCACA GGCAAGACCA TCACTGGAAG TCAGCCAGCT
TTCTTCCATA CATATCAATT CTTAAACGGC CAAAAGCTCG GGGTTATCAA ACTTCATAAG
GAGATAATCA AGCAATTGGC AGGAAGATCA TTATCTAATG CCGTCCAGCC ACAATTATTG
CCTATGCTTG TTGCACCAAG AGAATGGCAC AGTTACAACG ACGGTGGATA TCTTTACTCT
AGATCGACTT TGGTGAGAAT TAAGGACTCG GCTGAAACCA CTGCATACTT GAGAAAGGCT
GCTGATTTGG GTAATTTGAA TGAAGTTTAT GATGGATTGA ATGTTCTTGG AAAGACACCA
TGGACTGTCA ATCGTCGTGT CTTTGAAATT ATCACTAGGT ACTGGAACTC TGGAGAGGAA
TTCTTGGACA TTCCACCTAT TATGGAAGAA CCAAACTTGC CTGAGCCATT ACCTGTCGAT
GCTGAGCCTG CTCAAAAGTT TGAGTATCAA AGAAAGCTCA GAAGCGCCTT GAATGAAGCA
GCATCACTTA GATCTCAGAG GTGTGACACC AACTATAAGT TGGAAATCGC GAGAGGTTTC
TTGGGCGAAA AGGTATTCTT CCCTCACAAC GTCGACTTCA GAGGCAGAGC ATATCCAATC
TCACCACATT TCAACCACTT GGGTAACGAT CTTACCAGAT CCTTGTTCTT GTTCTGGGAA
GGCAGAGAAC TTGGTGAAAG AGGTTTGGAA TGGTTGAAAA TTCATTTGGC TAACGTGTAT
GGTGTAGACA AGGCACCATT AAACGAAAGA GTTCAGTTTG TCAATGACAA TTTGGAAAAT
GTCTTTGAAT CGGCAAGAAA CCCATACGAT ACAGATGCCT GGTGGAAGAA GGCAGAGAAG
CCATGGCAGG CATTGGGTGT CTGTTTTGAA TTGGAAGAAG CCTACAAATT GGAGAATCCA
ACTCAATATG TTTCGCACAT TCCAATCCAT CAGGATGGTA CTTGTAATGG TTTGCAACAC
TATGCCGCTT TGGGAGGTGA TATTGAAGGT GCAAGGCAAG TTAATTTACT TCCTGCCGAC
AGACCTCAGG ATGTGTACAA GTACGTTGCC TCGTTGGTTC AAAAGAGAAT CGACGCTGAA
GCTGAAGAAG GGAACAAGTA TGCCGTTTTC TTACAGGACA AGATCACACG TAAAGTGGTC
AAGCAAACCG TCATGACTAA TGTCTATGGT GTCACCTTCG TTGGTGCTAC TGCCCAAATC
AAGAAACAGA TAGACCAATA CTTCAGCGGT GAGGAAGACG TTGCTGACTA TGCAAGATAC
TTAACGATGC ACGTTTTCAA CTCCATTAGA GAATTGTTTG AAGGTGCGCA TTTGATTCAA
GATTGGTTGG GTGATGCTGC CAAGAGAGTC AGTAAGTCTG TACGTATTGA CTACGAGGAT
GCCAAGTCCA ATGATGGTAA ACCAAACCAT TTGTCTTCTG TCATATGGAC CACACCTCTT
GGATTGCCAT GTGTCCAACC TTACAGAATA TCCAAAAATC AATTGATCAA GACCAATTTG
CAAGATATTT CCATTTCTGA CCCATTTAGT GCATCGCAAG TTGATGCTAG AAAGCAGCAA
GCAGCATTCC CACCTAATTT TGTCCATTCG TTGGATGCCA CTCACATGCT AATGACAGCA
AAGGCTTGTG GGGATGCCAG ATTGTCGTTT GCTTCGGTTC ATGACTCATA CTGGACTCAT
GCTGCCGATG TGGACCATAT GAACAAGGAA ATCAGAAACC AGTTTGTGAA GTTGCACAGT
AGTAATTTGG TTCAGGAGCT CAAGGAAGAG TTCGAAAAGC GTTATAAAAA CTGTCTTCAG
GTGATAAGCA TTTCTGGAGA GCATCCATTG GCCAAGGAGA TAAAGGAAGT TAGAAGAAAT
AACGTCAAGA TTTTGGGCAG AGCTATGACT GCAGCTGACG AAATCTACTT GGAAAAGACC
AGATTAGAGC ATTTGAACTC CGAAGATCCA GAGAAGGTCA AGATTGGTAA GGAAATGGTC
ACTACAGTAA GTGTTACAGA AAAATACGAT TTAAATTCCA TTGTGGGAAC CACCAAGAAC
TTCCAGATCT TGGTTCCATT GACATTCCCA GACATTCCAG CCAAGGGTGA GCTTGACGTT
GAGGTAGTCA AGGAATCACC ATATTTCTTT TCATGA
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| Protein sequence | MHQFLEHLKL QDQEIKKSPS IHNKTFSEII ENEPESITDE QRRLRVWSSD YDPVTRSPFA
KDVSHLQSLL EVLLTSKNFD RARKILEAIH PLLSEPHTFI FSVNKYLQTW SHDPSVHYGD
LEQFFSTMEQ RYGITANERT FAIILAKYIS EDGPYISYLN RFSQSKKTQI LSYIDVIGVE
GLMKVFSDNS ISIEDVPEDL VNLFREVRNE LNDKETLISE PEYFNDDNTE VPTVDKDAES
LRAVDSFGLK VIRHTLLGLR EEADSKEIVS IIKQMEDGLG NQSWSDDEAS KLDFFKVYKT
LKTEEQREKF NSGLHSFNLT RQRRLEVRGA DGAKEKWKHE FEEMQKRGAL PLNKGLNAQL
FQWYKNLLPY VKKEAEMCQK LMDGKVSKTD LSPDEKKLYK DREYYAPYMV LVPPEKMCVI
TILELLKLNS TGGIVDGMRA ARALISVGKA VELEYKSQSL LKSEIKAFSK KVKSTNQWKR
ILSNKKNNII ENPDDSTDWS YTVYAKLGAV LTNLLLFVAK VPVKAHNPTT GKTITGSQPA
FFHTYQFLNG QKLGVIKLHK EIIKQLAGRS LSNAVQPQLL PMLVAPREWH SYNDGGYLYS
RSTLVRIKDS AETTAYLRKA ADLGNLNEVY DGLNVLGKTP WTVNRRVFEI ITRYWNSGEE
FLDIPPIMEE PNLPEPLPVD AEPAQKFEYQ RKLRSALNEA ASLRSQRCDT NYKLEIARGF
LGEKVFFPHN VDFRGRAYPI SPHFNHLGND LTRSLFLFWE GRELGERGLE WLKIHLANVY
GVDKAPLNER VQFVNDNLEN VFESARNPYD TDAWWKKAEK PWQALGVCFE LEEAYKLENP
TQYVSHIPIH QDGTCNGLQH YAALGGDIEG ARQVNLLPAD RPQDVYKYVA SLVQKRIDAE
AEEGNKYAVF LQDKITRKVV KQTVMTNVYG VTFVGATAQI KKQIDQYFSG EEDVADYARY
LTMHVFNSIR ELFEGAHLIQ DWLGDAAKRV SKSVRIDYED AKSNDGKPNH LSSVIWTTPL
GLPCVQPYRI SKNQLIKTNL QDISISDPFS ASQVDARKQQ AAFPPNFVHS LDATHMLMTA
KACGDARLSF ASVHDSYWTH AADVDHMNKE IRNQFVKLHS SNLVQELKEE FEKRYKNCLQ
VISISGEHPL AKEIKEVRRN NVKILGRAMT AADEIYLEKT RLEHLNSEDP EKVKIGKEMV
TTVSVTEKYD LNSIVGTTKN FQILVPLTFP DIPAKGELDV EVVKESPYFF S
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