| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2266 |
|---|
| Symbol | |
|---|
| ID | 1045161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2586633 |
|---|
| End bp | 2589191 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637145688 |
|---|
| Product | DNA-directed RNA polymerase, bacteriophage and mitochondrial type |
|---|
| Protein accession | NP_744415 |
|---|
| Protein GI | 26988990 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5108] Mitochondrial DNA-directed RNA polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.311743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0117981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCT CTATGACTCC TCTAGTTGGC CGCCTGGATG GTGAAGACCT CATCGCCACC
CAAGTCCGTC TGGAAGAGGA GATGACCCAG CGCGGTGTGA GCCGTTTCCA GCGCAACGTA
GAGGCCGCCC GGAGGATGGG CGCTGAGGAT GGCACCGAGT ACGGCTCCAT CATCGTCTCC
GGCCGCATGA AGGCGCTCGC TGAGGCCATC AAGGCGTGGA TGGATGAGTC TGAGGCCGGT
GTGTCGTCCC GCTGGGGCAG CGCATACAAG CTCCTCCGTG GCTACGATGC GGATGTCCTG
GCCTACCTGA CCCTCAAGCA CACCCTGGCT GGCATCTCGC AGCCCCGCAC GCTCCAGCAT
GTGTCCGTCT CCATCGCTCA GTCCGTGGAA GACGAAATGC GCCTGTCCGG CATCCGCGAC
AAGGAGCGCA AGAAGTACGA CCAACTGGTA GAGCGGGCCA ACAAACGGTC CAGCCAGCGC
CACAAGCACA TCTACGCCAC CCGTGTGGCC TCTGCGCTGG ACACCTGGAG CAACTGGAGC
AACAACGACC GCATCCACGT AGGGACCAAG CTCCTGGAGC TGCTGATGAA CTCCGTGGGG
CTGATCCACA TTGCCACCAA CGGCGAAGGC ACGGAGAAGG CACTGAAGTA CGTGAAGCCG
CTGGAGTCCA CCCTGGAGTG GATCGCCCGC AAGAACAACG TCACGGCCAT GCTGCGCCCC
GTGTATGAGC CGATGGTTGT CCCGCCACGC AACTGGACCT CACCGACCGA TGGGGGCTAC
CTGTCGTCCA GCCTCAAGCC GCTGCGCATG GTGAAGACCC GCAACCGGGC ATACTTGGAA
GAGCTGGGCA ACGTCGATAT GCCGATGGTC TACACCGCGC TCAACGCCAT CCAGGCCACC
GCGTGGCAGA TCAACACGCC AATCCTGAAC ATCATGACCA CGCTGTGGGA GCAGGGCGCC
ACCTGGTGCG GCCTCCCACC CCGTGAAGGC ATCCCCCAGC CAGTCAAACC GTTCGACATC
GACACCAACG AGGTGGCCCG CGCTGCCTGG CGTAAAGCCG CGTTCAAGGC CCATTCGGAC
AACCTGGAGA TTCAGGGCGC GCGCATCAAC GTCTCCATGT CCCTGGACAT CGCTAACCGC
TACTCCCCGT TCCGCAAGAT TTACTTCCCG TACCAACTGG ACTTCCGTGG CCGCATCTAC
GCGGTGCCGC ACCTGAACCC CCAAGGCGCG GACCACACGA AGGGCTTGCT CCGATTCGCC
TACGGCAAGC CGCTGGGCGA GCATGGGGCC AAGTGGCTGG CAATCCACGG GGCGAACGTG
GCCGGGTACG ACAAGGCCAG CCTGGAGGAC CGCGTGAAGT GGGTCCACGA TCACCAAGCG
GAAATCCTGG CGATTGCTGC TGACCCGTTC CAGGCACGCG GCTGGGCCGA CCACGTAGGC
GCGCAGGCCA TCGACAAACC ATGGCAGTTC CTGGCGTTCT GCCTGGAGTG GAAGGGCTAC
TGCGAGCACG GCGACCGCTT TGTGTCGAAG CTCCCGATTG CTATGGACGG CTCATGCTCC
GGCATCCAGC ACTTCTCCGC GATGCTCCGG GATGAGGTCG GTGGCGCAGC CGTGAACCTG
GTCCCTAGCG ACCTCCCCGC AGACGTGTAC GGCCTGGTAG CCAAAAAGGT CATCGAGCGG
GCCATTCACG ATGCCAAGCA CGGCACTGAG GACGTCCTGA AACATGACGC TGATGGCAAG
GCATACGTCC AGGAGGGCAC GAAGAACCTG GCCCAGCAAT GGACCCGCTT TGGCATCAAC
CGCAAGGTGA CGAAGCGCTC CGTGATGACC CTGGCCTACG GCTCCAAGGA GTACGGCTTC
AAGGATCAGG TAATGGAGGA CATCCTGGAC CCGGCACGCA AGAAAGCCAC CGATGCCGAA
GGCAACGTGG ACGCCCGCCA CTTCCCGTTC ACCGGGGATG GCTTCCGGGC CGCTGGCTGG
ATGGCGAAGG CCATTTGGGA AGCCGTGAAC CAGGTTCTGG TGAAAGCTGG TGAGGCCATG
AAGTGGCTCC AGGACGCTGC AACCCTGGCC GCAAAAGAAG AGCTGCCGGT GTGCTGGACC
ACTGCCGTGG GCTTCCCGGT GATGCAGGCG TACAACTCCG TGGTAGCTCG CCGCGTCAAA
ACGGCCATCA ACGGGGCCCG TGTGCGCCTC CTGATGAACG AAGAGCAAGA CGCCCTGGAC
AAGCGCAAGC AGTCGCAGGG GATCAGCCCC AACTTCGTCC ATAGCTGCGA TGCGGCCCAC
CTCATGCTCA CCGTTGTGCG TGGCGTGGAG TCCGGCTTGA AGAGCTTCGC GATGATCCAT
GACAGCTTCG GCACCACCGC AGGGGAGACC GAGCTTTTCT TCATGACTGT CCGCAAGGCG
TTCATTGAAA TGTACGAAGA GACCGCCGTA TTGGAGCGCT TCCGGGATGA GCTGGCCGCA
CAACTGAGCG ACAAGGCGCG GGCCAAGCTC GCAGAACTCC CGAAACGCGG CAGCCTGAGC
CTGGCAGCCG TAGCAGAGTC GCGCTTTTGC TTTGCCTGA
|
|---|
| Protein sequence | MTTSMTPLVG RLDGEDLIAT QVRLEEEMTQ RGVSRFQRNV EAARRMGAED GTEYGSIIVS
GRMKALAEAI KAWMDESEAG VSSRWGSAYK LLRGYDADVL AYLTLKHTLA GISQPRTLQH
VSVSIAQSVE DEMRLSGIRD KERKKYDQLV ERANKRSSQR HKHIYATRVA SALDTWSNWS
NNDRIHVGTK LLELLMNSVG LIHIATNGEG TEKALKYVKP LESTLEWIAR KNNVTAMLRP
VYEPMVVPPR NWTSPTDGGY LSSSLKPLRM VKTRNRAYLE ELGNVDMPMV YTALNAIQAT
AWQINTPILN IMTTLWEQGA TWCGLPPREG IPQPVKPFDI DTNEVARAAW RKAAFKAHSD
NLEIQGARIN VSMSLDIANR YSPFRKIYFP YQLDFRGRIY AVPHLNPQGA DHTKGLLRFA
YGKPLGEHGA KWLAIHGANV AGYDKASLED RVKWVHDHQA EILAIAADPF QARGWADHVG
AQAIDKPWQF LAFCLEWKGY CEHGDRFVSK LPIAMDGSCS GIQHFSAMLR DEVGGAAVNL
VPSDLPADVY GLVAKKVIER AIHDAKHGTE DVLKHDADGK AYVQEGTKNL AQQWTRFGIN
RKVTKRSVMT LAYGSKEYGF KDQVMEDILD PARKKATDAE GNVDARHFPF TGDGFRAAGW
MAKAIWEAVN QVLVKAGEAM KWLQDAATLA AKEELPVCWT TAVGFPVMQA YNSVVARRVK
TAINGARVRL LMNEEQDALD KRKQSQGISP NFVHSCDAAH LMLTVVRGVE SGLKSFAMIH
DSFGTTAGET ELFFMTVRKA FIEMYEETAV LERFRDELAA QLSDKARAKL AELPKRGSLS
LAAVAESRFC FA
|
|---|
| |