10 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_12779 on replicon NC_011677
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011677  PHATRDRAFT_12779  predicted protein  100 
 
 
89 aa  184  3e-46  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0776708  n/a   
 
 
-
 
NC_009043  PICST_65363  RNA polymerase I and III subunit  38.2 
 
 
119 aa  69.7  0.00000000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.285306  normal 
 
 
-
 
BN001301  ANIA_06558  DNA-directed RNA polymerase I and III 14 KDA polypeptide (AFU_orthologue; AFUA_6G04610)  37.65 
 
 
137 aa  67.4  0.00000000006  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.336636  normal 
 
 
-
 
NC_009357  OSTLU_30435  predicted protein  41.67 
 
 
100 aa  67  0.00000000007  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.129131  normal 
 
 
-
 
NC_006684  CNB01370  DNA-directed RNA polymerase, putative  48.89 
 
 
155 aa  61.6  0.000000003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.291062  n/a   
 
 
-
 
BN001302  ANIA_04269  DNA-directed RNA polymerase II subunit RPB11a, putative (AFU_orthologue; AFUA_7G03860)  48.98 
 
 
129 aa  53.5  0.000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  hitchhiker  0.00540677 
 
 
-
 
NC_006684  CNB02280  DNA-directed RNA polymerase ii 13.3 kda polypeptide, putative  35.9 
 
 
162 aa  50.1  0.00001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.17103  n/a   
 
 
-
 
NC_009046  PICST_62535  RNA polymerase II core subunit  33.33 
 
 
122 aa  48.1  0.00004  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.185842  normal 
 
 
-
 
NC_009361  OSTLU_35735  predicted protein  43.75 
 
 
115 aa  48.1  0.00004  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0691994  normal  0.967834 
 
 
-
 
NC_011681  PHATRDRAFT_47430  predicted protein  32.53 
 
 
125 aa  46.2  0.0001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
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