Gene PHATRDRAFT_47430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47430 
Symbol 
ID7202460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp605240 
End bp606213 
Gene Length974 bp 
Protein Length125 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181764 
Protein GI219122878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTCTGCAGA AGGAAAACAA GCTGCTTCGG GTTTTGACTG ACTGTGAGAG AAAATAATTG 
TACTGAGCTC AAGTTGAAAC GTACTGACTG CGAGAGAAAA TAGTTGTACC GAGTTCAAGT
TGAAACGAGC TACGAATAAA AATCATAAGT CGGCAGTGGT GATACAGGAC AGCTGTTTGA
AGTGAGGTGA TTGGGAGCAT GAACGCACCA GAACGCGCTT CGTCCTTTTT GTTGGACGAA
GATAGTGGTG AACGCAAGAT CGTCTACACC ACTGACACAA AAGTGACAAA CGCCGGTACC
TTCCGACTCA ATAAAGAAGA TCACACAGTT CTGAACTTAT TGCGAATGCA GCTTCTTCGC
GATCCTGGTG TTCGCTTTGC TGGTTACATC CACCCCCATC CGCTTATAAA TTATATGGAG
CTAAAAGTCC AAACAAACAG CAGCCATACT TCTCCAACTG AAGTTTTATC AAATGCAATT
GAAGACTTGG GAAGCGAGAC AGACCATCTG CTGAAAGAAG TACAGAATGC GATGGAGAAT
TGGAGAAAGG AAAACCAGGA CGTGCTAGGA AACTAGGTCT ATAGCGCAAC TCGGTTGTTG
TTCCGATAAA TAGTACACTT TAGCAAATTG TACAATGCAT CAACCTTCAT AGTGCGTGAA
GGATGAATAC CCCACTCATG AAAAGACGAC TTGAAGAAGC CCGGTAAGAT ACATCGTGCA
GAGGAGCAAC AGAATCGTTT GTAATCCTTT ACATGTTTAC CAGGTCCAAA GTACAACGTC
TTTGCAAGCA CTGGCCAGCT GTATATTAGC TGGATTGGAG GCGATTGCTC CAATCGGTCC
AACATGACCA TCCAATCGTT TAACCATCAT TCCTGTTTTA AGGTTGTAGC AATATATTGT
CCCGTCGTCG TGGCCTTCTA TCAAAGCCGC GTCGTCCCCC GAAAAGCAGG AGACCGCCGG
TTCAAGAGAC TTAC
 
Protein sequence
MNAPERASSF LLDEDSGERK IVYTTDTKVT NAGTFRLNKE DHTVLNLLRM QLLRDPGVRF 
AGYIHPHPLI NYMELKVQTN SSHTSPTEVL SNAIEDLGSE TDHLLKEVQN AMENWRKENQ
DVLGN