5 homologs were found in PanDaTox collection
for query gene PC1_2195 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_2195  type III secretion apparatus protein, HrpE/YscL family  100 
 
 		 199 aa  404  1.0000000000000001e-112  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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NC_012912  Dd1591_1901  type III secretion apparatus protein, HrpE/YscL family  45.83 
 
 		 200 aa  168  4e-41  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_0026  HrpE/YscL family type III secretion apparatus protein  30.57 
 
 		 195 aa  83.2  0.000000000000002  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_1386  type III secretion protein HrpE  34.25 
 
 		 193 aa  70.1  0.00000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
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NC_007005  Psyr_1197  type III secretion protein HrpE  29.35 
 
 		 193 aa  68.2  0.00000000007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.0989944 
 
 
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