Gene Dd1591_1901 details

Gene Information

• Locus tag: Dd1591_1901
• ID: 8119378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 2168922
• End bp: 2169524
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644852292
• Product: type III secretion apparatus protein, HrpE/YscL family
• Protein accession: YP_003004230
• Protein GI: 251789509
• TIGRFAM ID: [TIGR02499] type III secretion apparatus protein, HrpE/YscL family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGACCA GACGGTGCCT AAAACTGGTA GCGGGAACGG ATGTACAGGA AGCGGAACTG 
ATTCGGGTTG AACAATTACA ACAGCATCAA CGCGGCCTGG CGGTGATAGA AGAAGCGCGG 
CAACAGGCCG ATGTGTTGCT TGACGAAGCA CGCCGGCAGG CGCAGGAATC GATTGCCGTT 
GCCACCGGGC AGGCGGAGCA ACAATTCTGG CGGCAGGCGG ATGAGGTATT GCGCGGCTGG 
CAACAGGAGC GCGAGCAAAT GGAAAGCTGG CTGGTATCGC AATGCAGCCA GTTGCTGACC 
GATGCCATGA CCCAACTTCT CAAAACCGTA CCCGATGCAG AGCGTTACCC GGCGCTGTTG 
CGCCAGTTAT TGCGCACACA AGGCGGAGAA GGCAGCGGCA CGCTGTATTG CCATCCCGAA 
CGTCAGGCCG ATGTGTCCGC CTGGCTGACC GAACATCGCC ACCTTGGCTG GAAATTGAGT 
AACGATGACG CGCTGGCGCA GGATACCCTG AAATTGATCA CCGCACAGGG CGTGATGACC 
CTGAGCTGGC AGCGAGCGGT AGAACAGTTG CTGCCGCAGA CGGAGACGTT CTCGTTAAAC 
TGA 

 

Protein sequence

MLTRRCLKLV AGTDVQEAEL IRVEQLQQHQ RGLAVIEEAR QQADVLLDEA RRQAQESIAV 
ATGQAEQQFW RQADEVLRGW QQEREQMESW LVSQCSQLLT DAMTQLLKTV PDAERYPALL 
RQLLRTQGGE GSGTLYCHPE RQADVSAWLT EHRHLGWKLS NDDALAQDTL KLITAQGVMT 
LSWQRAVEQL LPQTETFSLN