| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1197 |
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| Symbol | HrpE |
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| ID | 3366691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1356477 |
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| End bp | 1357058 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651538 |
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| Product | type III secretion protein HrpE |
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| Protein accession | YP_234289 |
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| Protein GI | 66044448 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0989944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGCCA AACGCAGTAT TACCCTGACT GCCGACGCGG TGCTGCCCGA GCCGGTATTG
CGCCGTGAAT ACATCGCCAA CAGCCTGCTG GCTCGCGATA TTCTGACTGA CGCGCAACGT
CAGGCGGAGC AGATGCTGGT ACTTGAGCAG GCTAAAGCCG ATCGTCGGCA TCAGGAGGCG
CTTGCGCAGT TCTGGGAGCG CGCCAATGCC TTTCTGGACG AGCTGCACGT CCAGCGCGAA
GCCTTGCAGC AGCAGGCCAT GACTGCTGTA GAGGAGCTGC TGACTGAGGC ATTGAGCCAG
TTACTCGACG AAACGACCCT TGCCGAGCGT GCTCGGGCAC TGGTCAGGAA CCTGGCAGCC
AGCCAGCTTA ACGAAGCAGT GGCCACACTC AGCGTTCATC CGGAGATGGC CGAGCCGGTC
GCCGAATGGT TGGCAGAGAG CCGTTTTGCC GAGCACTGGG CGCTCAAACG GGATGCGACG
CTGGCCACTG AAAGCCTGCG CTTGAGCGAC GCCAACGGCG CTTTCGAAAT CGATTGGGCA
ACGCTGCGCA ATGGGCTGGC AGGCGCGGAG CCGGCTGCCT GA
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| Protein sequence | MLAKRSITLT ADAVLPEPVL RREYIANSLL ARDILTDAQR QAEQMLVLEQ AKADRRHQEA
LAQFWERANA FLDELHVQRE ALQQQAMTAV EELLTEALSQ LLDETTLAER ARALVRNLAA
SQLNEAVATL SVHPEMAEPV AEWLAESRFA EHWALKRDAT LATESLRLSD ANGAFEIDWA
TLRNGLAGAE PAA
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