| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0026 |
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| Symbol | |
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| ID | 5106701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 26417 |
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| End bp | 27004 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501243 |
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| Product | HrpE/YscL family type III secretion apparatus protein |
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| Protein accession | YP_001185533 |
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| Protein GI | 146305068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACTA AACGCCGCTT CACCCTTGGC TCAGCGGTAC TCGAAGAACC GATTCTGCGC
CGACAGCTGC TTGCAGAAAG CCTGCGCGCG GACGAGCTTC TGGCCCAAGC ACGCCTGCAG
GCCGAACAAT TGCTGCAGCA GGCCCACGAG CAGCGCCAGC ACTACCTCGA TGAAGCCGTC
GCCCGCTTCT GGAGCGAAGC CAACGCACTG CTTCAGGCGA TACAGGAGGA ACGCGCAAGT
TATCAGCGCG ATGCCTTGTC CGCTGTCGAC TCGCTATTGA ACATCGCCCT GTCGCGTTTG
CTGGATGAAA CGGATCTGCC GCAGCGGATC AGCGCATTGC TGCGCAACCT GGTCGTTGGC
CTGCCAAGCA AGGCGGAGGC GAACCTGGCC TGTCACCCCG AAGCCGCCAG CACGGTTCGC
GCCTGGCTGC AGACGATGGG CTTCGACGCG CTCTGGCAGG TGCAGGAAGA CCCAGGCATG
GCACCTGAAT CGCTACGCCT GAGCAACACG CTGGGTACCT TTCACATCGA CTGGCCGTCG
TTGCGGCGCG GGCTGATACC GAGCCTGCCC GAAGCCCGGC ATGCCTAA
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| Protein sequence | MLTKRRFTLG SAVLEEPILR RQLLAESLRA DELLAQARLQ AEQLLQQAHE QRQHYLDEAV
ARFWSEANAL LQAIQEERAS YQRDALSAVD SLLNIALSRL LDETDLPQRI SALLRNLVVG
LPSKAEANLA CHPEAASTVR AWLQTMGFDA LWQVQEDPGM APESLRLSNT LGTFHIDWPS
LRRGLIPSLP EARHA
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