9 homologs were found in PanDaTox collection
for query gene Noca_3822 on replicon NC_008699
Organism: Nocardioides sp. JS614



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_3822  hypothetical protein  100 
 
 
490 aa  990    Nocardioides sp. JS614  Bacteria  normal  0.031847  n/a   
 
 
-
 
NC_008699  Noca_3823  hypothetical protein  47.31 
 
 
529 aa  436  1e-121  Nocardioides sp. JS614  Bacteria  decreased coverage  0.000781142  n/a   
 
 
-
 
NC_008699  Noca_1690  hypothetical protein  37.58 
 
 
533 aa  251  3e-65  Nocardioides sp. JS614  Bacteria  normal  0.095239  n/a   
 
 
-
 
NC_011146  Gbem_2740  hypothetical protein  32.51 
 
 
610 aa  113  9e-24  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0048024  n/a   
 
 
-
 
NC_012918  GM21_1501  hypothetical protein  30.48 
 
 
608 aa  112  2.0000000000000002e-23  Geobacter sp. M21  Bacteria  n/a    normal  0.96972 
 
 
-
 
NC_009483  Gura_3712  hypothetical protein  28.66 
 
 
603 aa  110  5e-23  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.000000102893  n/a   
 
 
-
 
NC_013440  Hoch_6723  TonB-dependent receptor  29.92 
 
 
1128 aa  83.6  0.000000000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1633  hypothetical protein  29.46 
 
 
619 aa  47  0.0007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.172693 
 
 
-
 
NC_008347  Mmar10_2687  peptidase domain-containing protein  47.17 
 
 
747 aa  46.6  0.001  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>