9 homologs were found in PanDaTox collection
for query gene Noca_3823 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_3823  hypothetical protein  100 
 
 
529 aa  1068    Nocardioides sp. JS614  Bacteria  decreased coverage  0.000781142  n/a   
 
 
-
 
NC_008699  Noca_3822  hypothetical protein  48.71 
 
 
490 aa  438  1e-121  Nocardioides sp. JS614  Bacteria  normal  0.031847  n/a   
 
 
-
 
NC_008699  Noca_1690  hypothetical protein  36.23 
 
 
533 aa  263  8.999999999999999e-69  Nocardioides sp. JS614  Bacteria  normal  0.095239  n/a   
 
 
-
 
NC_009483  Gura_3712  hypothetical protein  34.94 
 
 
603 aa  124  4e-27  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.000000102893  n/a   
 
 
-
 
NC_011146  Gbem_2740  hypothetical protein  31.96 
 
 
610 aa  115  2.0000000000000002e-24  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0048024  n/a   
 
 
-
 
NC_013440  Hoch_6723  TonB-dependent receptor  34.93 
 
 
1128 aa  108  4e-22  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1501  hypothetical protein  31.86 
 
 
608 aa  107  7e-22  Geobacter sp. M21  Bacteria  n/a    normal  0.96972 
 
 
-
 
NC_008347  Mmar10_2687  peptidase domain-containing protein  29.34 
 
 
747 aa  53.5  0.000008  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0200  hypothetical protein  34.86 
 
 
763 aa  49.7  0.0001  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
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