| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2740 |
|---|
| Symbol | |
|---|
| ID | 6782738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3167693 |
|---|
| End bp | 3169525 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642768733 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002139540 |
|---|
| Protein GI | 197119113 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0048024 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCTTT TCTCTAAGAT GCGCGCTGTA CTCATGTTGC TGCTCATTCC GGTCGCCGCT
TCCGCAGCCC CGCTTGATGA CTACTACCTC TCGAAATTAG GGGAGCGGGC TCAGTTGGCC
AAGGCTTTGA GCGCGGTGGT GGGGCTTGAG ACCGGGCCTG CCGAGCGCTG CCGCACCGGC
CTCTATCGCA GCTTGAAGCG CGACTTCAAG GCGCTGGAAC CCGCCACCCA GAAGACGCTG
GCGAAATACG TCGCAAGGCC TGTCCTCTCG TCGGAGGCTG TCTATGTCTC CCCTGGCGGA
CACTTCAACA TCCACTACGC GACCTCCGGT TCCGATGCTC CCGTGCTTAC CGACACCACC
CCCGCCAACG GGATCCCGGA CTGGGTCGAA CGCGTGGCCC AGGTTTTCGA ATACGTCTAT
GCCGACGAGG TAACCGCCAA GGGTTACCGC CCGCCTCCGG TCAGCGGCAG ATACGACGTG
TATCTCCGTG ACCTTCTAAC CGAGCAGGCC TACGGTTATA CCAAGTTCGA CAGCGTGCCT
GCCTCCGCAG TCTCGGTGCC GAGCTATATC GAGATTGACA AGGCTTTCAG CGACCATATC
TTCACTGTCA ATGGCTTATA CAGCAGCGAT CAGATGCTGC AGATCACGGC TGCCCACGAG
TTTCATCACG CCATCCAGTT CGGCTATAAC TACTACTTCG ATATCTGGTA CGGCGAAGTC
ACCTCCACCT GGATGGAGGA TGAGGTGTAC GACTCGGTGA ACCAGTGTTA CAGCTACCTT
CCCAAGTACC TGCCCTTGGC AAGCACCATC TCCCTCAACA TGGGTCTGTA CCAGAATTCC
GAGTACGGCC GCTGGATCTT CAACCGGTAC CTCGCCGAAC GCCATGGCGC CGGCGCGGTA
AAGGCCGCGT GGGAGAAGCT GGCCACGCTG CAGCCTTCCA GCAGTCCGAC CACCAGCGAC
GGGGACATTC AGATGGGGCC GGTGCTGGAC TCGGTGCTCT CAACCTCTTA CAGCAGCAGC
CTCAGCGCCG ATTTCCTGGG TTTTGCCAAG AAGGTCTACA CCAGAGACTG GAATACCCAC
ATACCTGACA TAAGTATGAT CCCGCTCCAT GCTGTCGCGG CTACGTACTC CTCCTATCCG
GTCAACATCA GTTCCACCGA TAGGCCGTCG GTCACCCTGC CGCGGTATAC CTTTGCCTTT
TACCGGTTCG TTCCCTCGCC GGTCATCACC ACCTTCAACG TGAGGATCAC CAAGACCAGC
GGCATCCAGA CCGCCCTCTT CAAGAAAGAA AGCGGGGTGG TGAGCGAAAT AAGTGCCGAC
ACTGGCGGCA ACGCTTATTC GGTAATAGGT TTCAACGCGC TCAACCCTGC CAGCGACGAG
GTGGTGCTGC TTGTGGCCAA TACCACCGAC GTCGACAACC ACCAGGCCAA TTTCAGCACT
GACGGGAGCT CCTTGAATGT CTCCGAGCCG ACCGTGGCTG CTTCGGCGGG GGGCGGGGGA
GGCTCAAGCG GCGGCGGCTG CTTCATCGCC ACCGCGGCAT ATGGGAGTTA CCTGCATCCC
AAGGTCGCCG AGCTGAGACA ATTCCGGGAC CGCCATCTTC TCACCAACGC ACCGGGGCGG
CTCTTCGTCT CGCTCTATTA CCGGCTCAGC CCGCCGATCG CCGAGATCAT CGCGGAGCAC
GAATGGATGA AGGGTGGGGT GAGGGTTATG CTGGTGCCGG TGGTGCTGTC GGTCGAGCAC
CCGGCGGGAG CGCTGGCGGC AGTACTGCTG CTGATGGGAG GAGCGGGGGT GGTGAGGCGG
AGGAAGCTCG CCCTGGTCCG GGTGCGGCGG TAA
|
|---|
| Protein sequence | MALFSKMRAV LMLLLIPVAA SAAPLDDYYL SKLGERAQLA KALSAVVGLE TGPAERCRTG
LYRSLKRDFK ALEPATQKTL AKYVARPVLS SEAVYVSPGG HFNIHYATSG SDAPVLTDTT
PANGIPDWVE RVAQVFEYVY ADEVTAKGYR PPPVSGRYDV YLRDLLTEQA YGYTKFDSVP
ASAVSVPSYI EIDKAFSDHI FTVNGLYSSD QMLQITAAHE FHHAIQFGYN YYFDIWYGEV
TSTWMEDEVY DSVNQCYSYL PKYLPLASTI SLNMGLYQNS EYGRWIFNRY LAERHGAGAV
KAAWEKLATL QPSSSPTTSD GDIQMGPVLD SVLSTSYSSS LSADFLGFAK KVYTRDWNTH
IPDISMIPLH AVAATYSSYP VNISSTDRPS VTLPRYTFAF YRFVPSPVIT TFNVRITKTS
GIQTALFKKE SGVVSEISAD TGGNAYSVIG FNALNPASDE VVLLVANTTD VDNHQANFST
DGSSLNVSEP TVAASAGGGG GSSGGGCFIA TAAYGSYLHP KVAELRQFRD RHLLTNAPGR
LFVSLYYRLS PPIAEIIAEH EWMKGGVRVM LVPVVLSVEH PAGALAAVLL LMGGAGVVRR
RKLALVRVRR
|
|---|
| |