15 homologs were found in PanDaTox collection
for query gene Noc_2875 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_2875  hypothetical protein  100 
 
 
397 aa  822    Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1237  hypothetical protein  46.19 
 
 
474 aa  328  8e-89  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2236  hypothetical protein  41 
 
 
424 aa  302  6.000000000000001e-81  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1417  hypothetical protein  36.66 
 
 
367 aa  195  9e-49  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0157  hypothetical protein  33.88 
 
 
382 aa  181  2e-44  Methylobacillus flagellatus KT  Bacteria  normal  hitchhiker  0.00681714 
 
 
-
 
NC_011666  Msil_2000  hypothetical protein  32.57 
 
 
418 aa  179  9e-44  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_0983  hypothetical protein  31.57 
 
 
416 aa  174  2.9999999999999996e-42  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.686958  normal 
 
 
-
 
NC_007947  Mfla_1778  hypothetical protein  33.62 
 
 
216 aa  104  3e-21  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000267624  normal 
 
 
-
 
NC_007947  Mfla_1779  hypothetical protein  36.59 
 
 
148 aa  94.4  3e-18  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000647609  normal 
 
 
-
 
NC_011901  Tgr7_0072  phosphate-selective porin O and P  25.73 
 
 
396 aa  68.2  0.0000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0073  phosphate-selective porin O and P  24.06 
 
 
390 aa  63.9  0.000000005  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1253  hypothetical protein  26.22 
 
 
455 aa  60.5  0.00000006  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.00910104  normal 
 
 
-
 
NC_010814  Glov_1204  phosphate-selective porin O and P  22.25 
 
 
403 aa  49.3  0.0001  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00755858  n/a   
 
 
-
 
NC_011126  HY04AAS1_1055  hypothetical protein  24.43 
 
 
465 aa  45.4  0.002  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.0000000000114803  n/a   
 
 
-
 
NC_011126  HY04AAS1_0352  hypothetical protein  23.15 
 
 
448 aa  44.3  0.004  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.00000000000257502  n/a   
 
 
-
 
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