15 homologs were found in PanDaTox collection
for query gene CHU_1253 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_1253  hypothetical protein  100 
 
 
455 aa  929    Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.00910104  normal 
 
 
-
 
NC_011146  Gbem_4031  phosphate-selective porin O and P  25.41 
 
 
400 aa  77  0.0000000000006  Geobacter bemidjiensis Bem  Bacteria  normal  0.364483  n/a   
 
 
-
 
NC_012918  GM21_4122  phosphate-selective porin O and P  25.68 
 
 
399 aa  72.4  0.00000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.556284 
 
 
-
 
NC_007517  Gmet_0532  phosphate-selective porin O and P  26.09 
 
 
415 aa  70.5  0.00000000006  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000620522  normal 
 
 
-
 
NC_011901  Tgr7_0072  phosphate-selective porin O and P  25.81 
 
 
396 aa  68.2  0.0000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1204  phosphate-selective porin O and P  25.66 
 
 
403 aa  66.2  0.000000001  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00755858  n/a   
 
 
-
 
NC_009483  Gura_0451  phosphate-selective porin O and P  25.34 
 
 
401 aa  63.2  0.000000009  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000298497  n/a   
 
 
-
 
NC_002939  GSU2939  outer membrane porin FmdC, putative  24.14 
 
 
406 aa  62  0.00000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.440983  n/a   
 
 
-
 
NC_009483  Gura_0445  phosphate-selective porin O and P  25.07 
 
 
401 aa  62.4  0.00000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2875  hypothetical protein  26.22 
 
 
397 aa  60.1  0.00000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1175  outer membrane porin FmdC, putative  27.06 
 
 
489 aa  53.1  0.00001  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.000392921  n/a   
 
 
-
 
NC_007520  Tcr_1417  hypothetical protein  26.95 
 
 
367 aa  51.2  0.00004  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0983  hypothetical protein  26.49 
 
 
416 aa  48.5  0.0003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.686958  normal 
 
 
-
 
NC_011666  Msil_2000  hypothetical protein  30.1 
 
 
418 aa  46.6  0.0009  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007614  Nmul_A1237  hypothetical protein  24.14 
 
 
474 aa  45.4  0.002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
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