Gene Tcr_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1417 
Symbol 
ID3760784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1530270 
End bp1531373 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content41% 
IMG OID637786150 
Producthypothetical protein 
Protein accessionYP_391685 
Protein GI78485760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTA AAAATCAAAA ACGAGCACTT GGGTTGCTTG TCGGTGCTCT AACTGGTGGA 
GCACTGCTTT CAACAGCGTC AATTGCAAAT GCTGGTGTGA CGCTTAATGT TGATGATGAC
CGATGGGTAA AGATTGGCGC AGGTCTTAGA ACAAGTATTA CAACCACTGA TGATGATGGA
GCGACATCTC CAACAGATAT GGCTGTTAAT AATATGCGTT TTTATCTAAC CGCTCAAGCA
ATGAAAGATA TTCAGTTTAC CTTTAATACT GAAAAAGATG CTAACGATAA TATAAAAATG
TTAGACGCAG CAGCAAAATT TCATATCAAT GATGCTTTGA ATATTTGGGC TGGTCGAGTT
TTGATTCCTA CCGATAGAGC TAACTTAGAT GGACCATTTT ACCAAGCGGC TTTTGATTTT
CCTTCGGTAC GAAAATATCC ATCCATTAAT GCAGGACGAG ATGATGGTGT TATCTTCTGG
GGGCTAACCA ATAGTAAAAA AATTAAGTAT TACCTTGGCG CCACTCAAGG ACGTTCTGAT
GTAGGTGGTC CGAATGATTC TGGTAATTTG CTTTATTCCG GTCGCCTTGC TTTGAATTTA
TGGGATGCTG AATCAGGGTA TTTTAATCGA AGCACCTATC ATGGGAAGAA AGATATTCTT
TCCTTCGGTA TAGGTGGGGC TTACCAAGCA GATGGAGCTG GTACGGATGT TAACAATCAA
GGAAATTTTA CAGCTTGGAA TGCTGACTTC TTGCTTGAAA AGAAACTTTC CAATGGTGGT
GTAGGCACAC TCGAAGGCGC TTATTATTCA TATGACTTAG ATGGTGTAAC AGATCCGACT
CTTAAAGCAG GCAAATCTTA CTTGGCATTG GCTTCTTATA TGTTTCCGAC AAAAGTTGGA
ATTGGGCAAT TTCAACCTTA TACGCGTGTA CAACAATTTG ATTATGACGC AGCTGGTTCC
GGGACCATGG ATAAAACTGA ACTCGGCGTG AATTATGTTA TCTCGAGTCA TAATGCGCTT
ATTTCCGCAG TTGCTACCAA TACCGATGTT GCCGGTTCGC CTTCAGTTCG TACGTTTAAG
TTAGGTACTC AGCTTCAATT TTAA
 
Protein sequence
MKSKNQKRAL GLLVGALTGG ALLSTASIAN AGVTLNVDDD RWVKIGAGLR TSITTTDDDG 
ATSPTDMAVN NMRFYLTAQA MKDIQFTFNT EKDANDNIKM LDAAAKFHIN DALNIWAGRV
LIPTDRANLD GPFYQAAFDF PSVRKYPSIN AGRDDGVIFW GLTNSKKIKY YLGATQGRSD
VGGPNDSGNL LYSGRLALNL WDAESGYFNR STYHGKKDIL SFGIGGAYQA DGAGTDVNNQ
GNFTAWNADF LLEKKLSNGG VGTLEGAYYS YDLDGVTDPT LKAGKSYLAL ASYMFPTKVG
IGQFQPYTRV QQFDYDAAGS GTMDKTELGV NYVISSHNAL ISAVATNTDV AGSPSVRTFK
LGTQLQF