Gene Noc_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2875 
Symbol 
ID3705588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3255844 
End bp3257037 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content46% 
IMG OID637739351 
Producthypothetical protein 
Protein accessionYP_344851 
Protein GI77166326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTCGAA GCAATGACAA GAAAGGGCAT TACCGCTCAG GCATTGCTAG CGTCTTTATC 
CTGGTTATCA TGGGGCTCCC TAGCGTGGTT CAGGCGGCAG CAGGTTACTA CAAGCTTGAT
GAAACTAAAT GGATAAGTGT TGGTGGCGGT TTAAAATCGA GCTTTAAGGC AACCGAGAAC
GGTAATGTAA CGGGCGATGG TTGGAGCACC AATCCCACTA TCAATAATTT TCGTATTTAT
GTTAACGGGC AGCTGCATAA GTATATTAAA TTTGAATTTA ATACCGAGTG CGCAGCTTGC
GAGGAGGAAG GGGATATCAC GATATTGGAT GGAATCTTAA AATTTGACAT TACCGATTAT
TTCAATGTTT GGCTAGGACG CATGCTAACT CCCGCTACCC GGGGAGAGCT AAGCGGTCCT
TTTTTTCAAA ATATTTTCGA ATTTAATAGA ACTCCTTTCT ATCCTTCCGA TTTTTCTGGC
GAGAATCGTG AGGCGGGACG GTTCGGCCGC GATGAAGGGA TGAATCTCTG GGGTGCTTTA
GGCGCGGAGA AAAGATTCAC TTATGTGGCC GGTATATTTC GCGGCCACCA GGATGCGCCT
GGCCCCCTGT ACGCGGCGCG CTTGAGCTAT AACTTCTGGA ATGTAGAGCA AAATCCAGGT
TATTACACTA GCAGCACTTA TTATGGCGCG GCGGGCGATA TTTTTACCGT TGCTGCTGCC
TTTCAATATC AAGATAATGG CGTTGGCACG AGCGAAAATC CGGCGGATTT TTTAGGAACC
AATGCGGATC TCCTCATAGA GAAAGTGCTT GCCAATAAAG ATGTGTTGAC CCTCGAGGGA
GAGTACCAAT ATTTTGTTCC TAATTTAGAT CAAGCTGCGT TAGCCGCTGC AAATTGCTTT
TGCATCTTTG AAGGGCATGC CTATATGGCA ACGGCGCTTT ATCTGTTTTC TCAACAAGTA
TGGGTAGGTC AATTTCAGCC CTATATGCGC TGGACGGATA ATAGGCCCAG TAACAGTTCA
GACCGTAATG AGGTTGAAGT GGGCCTTAAT TATGTTCTAG ACGGACATGA CGCTAGGATC
TCTCTTTTTT ACCAATACGG TGATATTAAT ACTAAGGGAA GGGTTTGGGT CCCTGGCGTG
GAAGGAGAAA AAGTCAGTGC GGTTGGCATT GGTGTTCAAC TCCAGTTGCG GTAA
 
Protein sequence
MSRSNDKKGH YRSGIASVFI LVIMGLPSVV QAAAGYYKLD ETKWISVGGG LKSSFKATEN 
GNVTGDGWST NPTINNFRIY VNGQLHKYIK FEFNTECAAC EEEGDITILD GILKFDITDY
FNVWLGRMLT PATRGELSGP FFQNIFEFNR TPFYPSDFSG ENREAGRFGR DEGMNLWGAL
GAEKRFTYVA GIFRGHQDAP GPLYAARLSY NFWNVEQNPG YYTSSTYYGA AGDIFTVAAA
FQYQDNGVGT SENPADFLGT NADLLIEKVL ANKDVLTLEG EYQYFVPNLD QAALAAANCF
CIFEGHAYMA TALYLFSQQV WVGQFQPYMR WTDNRPSNSS DRNEVEVGLN YVLDGHDARI
SLFYQYGDIN TKGRVWVPGV EGEKVSAVGI GVQLQLR