9 homologs were found in PanDaTox collection
for query gene Noc_1875 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_1875  hypothetical protein  100 
 
 
293 aa  599  1e-170  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1656  hypothetical protein  25.81 
 
 
320 aa  73.2  0.000000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.290456  normal  0.0368168 
 
 
-
 
NC_009767  Rcas_2824  hypothetical protein  23.64 
 
 
320 aa  60.5  0.00000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_0928  TonB-dependent receptor, plug  29.25 
 
 
750 aa  48.5  0.0001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.228004  n/a   
 
 
-
 
NC_013093  Amir_5394  hypothetical protein  28.57 
 
 
195 aa  46.6  0.0004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3133  TonB-dependent siderophore receptor  30.67 
 
 
776 aa  47  0.0004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.989614  normal  0.593866 
 
 
-
 
NC_009441  Fjoh_1260  TonB-dependent receptor  35.29 
 
 
866 aa  45.4  0.001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1538  TonB-dependent receptor  39.13 
 
 
1232 aa  43.1  0.005  Candidatus Koribacter versatilis Ellin345  Bacteria  unclonable  0.000318851  normal  0.580638 
 
 
-
 
NC_013093  Amir_2932  hypothetical protein  25.73 
 
 
241 aa  42.7  0.007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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