29 homologs were found in PanDaTox collection
for query gene Nham_4503 on replicon NC_007960
Organism: Nitrobacter hamburgensis X14



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007960  Nham_4503  5-methylcytosine-specific restriction enzyme subunit McrC  100 
 
 		 361 aa  731    Nitrobacter hamburgensis X14  Bacteria  normal  0.544571  n/a   
 
 
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NC_010625  Bphy_6932  5-methylcytosine-specific restriction enzyme subunit McrC  46.57 
 
 		 363 aa  295  9e-79  Burkholderia phymatum STM815  Bacteria  normal  0.688838  normal  1 
 
 
-
 
NC_007969  Pcryo_0940  5-methylcytosine-specific restriction enzyme subunit McrC  40.45 
 
 		 374 aa  258  2e-67  Psychrobacter cryohalolentis K5  Bacteria  normal  1  unclonable  0.0000244795 
 
 
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NC_009524  PsycPRwf_1353  5-methylcytosine-specific restriction enzyme subunit McrC  41.81 
 
 		 363 aa  253  3e-66  Psychrobacter sp. PRwf-1  Bacteria  normal  1  hitchhiker  0.000239039 
 
 
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NC_008146  Mmcs_0828  5-methylcytosine-specific restriction enzyme subunit McrC  38.26 
 
 		 361 aa  221  9.999999999999999e-57  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
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NC_008705  Mkms_0845  5-methylcytosine-specific restriction enzyme subunit McrC  38.26 
 
 		 361 aa  221  9.999999999999999e-57  Mycobacterium sp. KMS  Bacteria  normal  0.405716  normal  1 
 
 
-
 
CP001637  EcDH1_3652  5-methylcytosine-specific restriction enzyme subunit McrC  26.49 
 
 		 348 aa  128  1.0000000000000001e-28  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_04175  hypothetical protein  26.19 
 
 		 348 aa  125  8.000000000000001e-28  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_04211  5-methylcytosine-specific restriction enzyme McrBC, subunit McrC  26.19 
 
 		 348 aa  125  8.000000000000001e-28  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_3753  5-methylcytosine-specific restriction enzyme subunit McrC  25.07 
 
 		 351 aa  102  1e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.537146  normal  1 
 
 
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NC_014150  Bmur_1283  5-methylcytosine restriction system component- like protein  21.39 
 
 		 350 aa  95.1  2e-18  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000000000000503694  n/a   
 
 
-
 
NC_013203  Apar_1213  5-methylcytosine-specific restriction enzyme subunit McrC  25.35 
 
 		 351 aa  92.8  8e-18  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.816052 
 
 
-
 
NC_013730  Slin_2471  5-methylcytosine restriction system component- like protein  28.09 
 
 		 428 aa  63.2  0.000000008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.248512 
 
 
-
 
NC_011757  Mchl_3309  IQ calmodulin-binding- domain protein  27.96 
 
 		 426 aa  61.6  0.00000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010159  YpAngola_A1240  hypothetical protein  23.16 
 
 		 438 aa  57.8  0.0000003  Yersinia pestis Angola  Bacteria  normal  0.0689849  hitchhiker  0.000177876 
 
 
-
 
NC_013158  Huta_1703  McrBC 5-methylcytosine restriction system component-like protein  24.84 
 
 		 421 aa  57.8  0.0000003  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_2661  hypothetical protein  24.31 
 
 		 429 aa  55.5  0.000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.706395 
 
 
-
 
NC_008261  CPF_0993  hypothetical protein  22.07 
 
 		 437 aa  53.5  0.000005  Clostridium perfringens ATCC 13124  Bacteria  normal  0.235646  n/a   
 
 
-
 
NC_010718  Nther_0806  McrBC 5-methylcytosine restriction system component-like protein  20.07 
 
 		 383 aa  52.8  0.000008  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0894928  hitchhiker  0.000053751 
 
 
-
 
NC_011992  Dtpsy_1862  hypothetical protein  25.78 
 
 		 431 aa  50.4  0.00004  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_007796  Mhun_1299  McrBC 5-methylcytosine restriction system component-like  22.39 
 
 		 437 aa  49.7  0.00007  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.000217939  normal  0.126015 
 
 
-
 
NC_007355  Mbar_A3270  hypothetical protein  22.42 
 
 		 453 aa  49.3  0.0001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0179938  normal  0.335413 
 
 
-
 
NC_014151  Cfla_3300  5-methylcytosine restriction system component- like protein  24.37 
 
 		 398 aa  48.5  0.0002  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_3669  putative 5-methylcytosine restriction system component  22.56 
 
 		 436 aa  48.1  0.0003  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C7439  McrBC 5-methylcytosine restriction system component-like  24.47 
 
 		 445 aa  46.2  0.0008  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009671  Oant_4726  hypothetical protein  24.14 
 
 		 422 aa  45.4  0.001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.445039  n/a   
 
 
-
 
NC_012793  GWCH70_1386  McrBC 5-methylcytosine restriction system component-like protein  19.06 
 
 		 411 aa  45.4  0.001  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_05460  McrBC 5-methylcytosine restriction system component  29.7 
 
 		 393 aa  45.1  0.002  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_2402  McrBC 5-methylcytosine restriction system component-like protein  34.31 
 
 		 431 aa  44.7  0.003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.073965 
 
 
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