24 homologs were found in PanDaTox collection
for query gene EcDH1_3652 on replicon CP001637
Organism: Escherichia coli DH1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
CP001637  EcDH1_3652  5-methylcytosine-specific restriction enzyme subunit McrC  100 
 
 		 348 aa  721    Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
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CP001509  ECD_04211  5-methylcytosine-specific restriction enzyme McrBC, subunit McrC  98.28 
 
 		 348 aa  711    Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
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NC_012892  B21_04175  hypothetical protein  98.28 
 
 		 348 aa  711    Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_3753  5-methylcytosine-specific restriction enzyme subunit McrC  30.95 
 
 		 351 aa  184  2.0000000000000003e-45  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.537146  normal  1 
 
 
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NC_014150  Bmur_1283  5-methylcytosine restriction system component- like protein  31.83 
 
 		 350 aa  175  9.999999999999999e-43  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000000000000503694  n/a   
 
 
-
 
NC_013203  Apar_1213  5-methylcytosine-specific restriction enzyme subunit McrC  28.28 
 
 		 351 aa  153  5e-36  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.816052 
 
 
-
 
NC_007960  Nham_4503  5-methylcytosine-specific restriction enzyme subunit McrC  26.49 
 
 		 361 aa  128  1.0000000000000001e-28  Nitrobacter hamburgensis X14  Bacteria  normal  0.544571  n/a   
 
 
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NC_010625  Bphy_6932  5-methylcytosine-specific restriction enzyme subunit McrC  25.93 
 
 		 363 aa  128  1.0000000000000001e-28  Burkholderia phymatum STM815  Bacteria  normal  0.688838  normal  1 
 
 
-
 
NC_008146  Mmcs_0828  5-methylcytosine-specific restriction enzyme subunit McrC  25.29 
 
 		 361 aa  105  1e-21  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
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NC_008705  Mkms_0845  5-methylcytosine-specific restriction enzyme subunit McrC  25.29 
 
 		 361 aa  105  1e-21  Mycobacterium sp. KMS  Bacteria  normal  0.405716  normal  1 
 
 
-
 
NC_007969  Pcryo_0940  5-methylcytosine-specific restriction enzyme subunit McrC  26.94 
 
 		 374 aa  93.2  5e-18  Psychrobacter cryohalolentis K5  Bacteria  normal  1  unclonable  0.0000244795 
 
 
-
 
NC_009524  PsycPRwf_1353  5-methylcytosine-specific restriction enzyme subunit McrC  24.51 
 
 		 363 aa  84  0.000000000000003  Psychrobacter sp. PRwf-1  Bacteria  normal  1  hitchhiker  0.000239039 
 
 
-
 
NC_010718  Nther_0806  McrBC 5-methylcytosine restriction system component-like protein  23.94 
 
 		 383 aa  63.5  0.000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0894928  hitchhiker  0.000053751 
 
 
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NC_013158  Huta_1703  McrBC 5-methylcytosine restriction system component-like protein  21.02 
 
 		 421 aa  60.1  0.00000006  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_009512  Pput_4619  McrBC 5-methylcytosine restriction system component-like protein  20.66 
 
 		 436 aa  50.8  0.00003  Pseudomonas putida F1  Bacteria  decreased coverage  0.000187053  hitchhiker  0.0000000628519 
 
 
-
 
NC_009637  MmarC7_0003  hypothetical protein  22.39 
 
 		 416 aa  50.8  0.00003  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00559809  unclonable  0.0000000111615 
 
 
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NC_013132  Cpin_3470  McrBC 5-methylcytosine restriction system component-like protein  22.22 
 
 		 423 aa  49.7  0.00008  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00801853  normal  0.511219 
 
 
-
 
NC_012912  Dd1591_3669  putative 5-methylcytosine restriction system component  26.67 
 
 		 436 aa  48.5  0.0002  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_3582  McrBC 5-methylcytosine restriction system component-like  21.9 
 
 		 405 aa  47.4  0.0003  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_1654  hypothetical protein  21.76 
 
 		 424 aa  45.8  0.001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.159244  n/a   
 
 
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NC_007958  RPD_1974  hypothetical protein  27.87 
 
 		 434 aa  45.4  0.001  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00010435  normal  0.369682 
 
 
-
 
NC_009338  Mflv_3197  McrBC 5-methylcytosine restriction system component-like protein  24.28 
 
 		 446 aa  45.1  0.002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0398257  normal  1 
 
 
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NC_013926  Aboo_1011  5-methylcytosine restriction system component-like protein  26.06 
 
 		 460 aa  44.3  0.003  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.00000144218  n/a   
 
 
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NC_010159  YpAngola_A1240  hypothetical protein  20.22 
 
 		 438 aa  42.7  0.01  Yersinia pestis Angola  Bacteria  normal  0.0689849  hitchhiker  0.000177876 
 
 
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